Gene Mmc1_3338 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmc1_3338 
Symbol 
ID4481614 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMagnetococcus sp. MC-1 
KingdomBacteria 
Replicon accessionNC_008576 
Strand
Start bp4156617 
End bp4157174 
Gene Length558 bp 
Protein Length185 aa 
Translation table11 
GC content58% 
IMG OID639724085 
Product3-deoxy-D-manno-octulosonate 8-phosphate phosphatase 
Protein accessionYP_867230 
Protein GI117926613 
COG category[R] General function prediction only 
COG ID[COG1778] Low specificity phosphatase (HAD superfamily) 
TIGRFAM ID[TIGR01662] HAD-superfamily hydrolase, subfamily IIIA
[TIGR01670] 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCGCTA AGGGCAAAGA GGGGGCTGTG GTGGAGGCAT CCATTCGTAC AAAATTAAAG 
GCGATCCGGC TGGTGGCTCT GGATGTGGAT GGGGTGCTTA CCGATGGGGG CATCTACTAC
GGCAATCAGG GCGAGGAGCT CAAACGCTTT TATGTGCAGG ATGGCTTGGG CATTCGTTTA
ATGTTGGATG CGGGTATCCA TGTGGGGTTG ATTACCGCGC GAAAATCCCA GTTGGTAGCC
CGGCGTGGGG CCGAGTTACA GATGAGTTTT GTGCACCAAG GGGTGAAGGA TAAGTGGTTC
TGTCTGTGCG AAGAGATGGG TCGTTTGGGG TTGGAGGCCA GTCAATGTGC CTATATGGGG
GATGATCTGA TCGACCTGGG CGTGTTGACG CGGGTCGGTT TGGCGGCCAC CCCTGCCGAT
GGACACGAGG CGGTGCGGGC GCGGGTGGAT TGGGTGGCAC CCAAGCCAGG GGGGGGCGGG
GCGGTACGCG CCTTGGCGGA TGCCCTGTTA CAAGCCAGGG ATCAGTGGGA TATTATCATG
GCGAGAATGA TTGGGTAG
 
Protein sequence
MTAKGKEGAV VEASIRTKLK AIRLVALDVD GVLTDGGIYY GNQGEELKRF YVQDGLGIRL 
MLDAGIHVGL ITARKSQLVA RRGAELQMSF VHQGVKDKWF CLCEEMGRLG LEASQCAYMG
DDLIDLGVLT RVGLAATPAD GHEAVRARVD WVAPKPGGGG AVRALADALL QARDQWDIIM
ARMIG