Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmc1_3335 |
Symbol | |
ID | 4481611 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Magnetococcus sp. MC-1 |
Kingdom | Bacteria |
Replicon accession | NC_008576 |
Strand | - |
Start bp | 4154716 |
End bp | 4155468 |
Gene Length | 753 bp |
Protein Length | 250 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 639724082 |
Product | ABC transporter related |
Protein accession | YP_867227 |
Protein GI | 117926610 |
COG category | [R] General function prediction only |
COG ID | [COG1137] ABC-type (unclassified) transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGAGCG GGGTCAACAG TGGGCAACCC ACAAGCCGGT TAGAGTCACG CAGTCTGAGC AAACGCTACC AAGGGCGGGA GATTGTCGCC AATGTGAGCA TCGGCGTGGA GCCGGGGCAG GTGGTGGGTC TGTTGGGTCC CAACGGAGCG GGCAAGACCA CGACATTCTA TATGTTTGTG GGGCTGGTGG GTCCGGATAG TGGCTCCATT GTGTTGAACG GGCGGGATAT TAGCGCCGAA CCGGTGTTTA AACGGGCGCG GGCTGGTATT GCCTATCTGC CCCAAGAGCC ATCGGTGTTT CGTAAATTGA CGGTGCGGGA CAATATTTTG TCGATTTTGG AAACCCTGCC CTTGGGCCGG GAGAAGCGTC TGCAAAAGTT GGAGTCGCTG ATGTTGGAGT TGGGTGTGGC CCATTTGGCC CGCACCAAGG GTTACTCTCT TTCGGGCGGC GAGCGCCGCC GGGTTGAGGT AGCGCGGGCG TTGGCCATTG AGCCCCGCTA TATTCTGCTT GATGAACCCT TTGCCGGGGT CGATCCCTTG GCGGTGGGGG ATATACAGTC GATCATTCGC CATCTAAAAG AGCGGGGCAT CGGCATATTG ATCACAGATC ATAATGTACG TGAGACGTTA GGGATCTGCG ACCACTCTTA CATTCTTTCC GAGGGGCGCG TGCTGGCAAG CGGCGAGCCG AGCAAGGTGG TGGAGGATGA ACGGGTGAAA AAGATGTATT TGGGTGAAAA TTTTAAACTC TGA
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Protein sequence | MKSGVNSGQP TSRLESRSLS KRYQGREIVA NVSIGVEPGQ VVGLLGPNGA GKTTTFYMFV GLVGPDSGSI VLNGRDISAE PVFKRARAGI AYLPQEPSVF RKLTVRDNIL SILETLPLGR EKRLQKLESL MLELGVAHLA RTKGYSLSGG ERRRVEVARA LAIEPRYILL DEPFAGVDPL AVGDIQSIIR HLKERGIGIL ITDHNVRETL GICDHSYILS EGRVLASGEP SKVVEDERVK KMYLGENFKL
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