Gene Mmc1_3335 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmc1_3335 
Symbol 
ID4481611 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMagnetococcus sp. MC-1 
KingdomBacteria 
Replicon accessionNC_008576 
Strand
Start bp4154716 
End bp4155468 
Gene Length753 bp 
Protein Length250 aa 
Translation table11 
GC content56% 
IMG OID639724082 
ProductABC transporter related 
Protein accessionYP_867227 
Protein GI117926610 
COG category[R] General function prediction only 
COG ID[COG1137] ABC-type (unclassified) transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGAGCG GGGTCAACAG TGGGCAACCC ACAAGCCGGT TAGAGTCACG CAGTCTGAGC 
AAACGCTACC AAGGGCGGGA GATTGTCGCC AATGTGAGCA TCGGCGTGGA GCCGGGGCAG
GTGGTGGGTC TGTTGGGTCC CAACGGAGCG GGCAAGACCA CGACATTCTA TATGTTTGTG
GGGCTGGTGG GTCCGGATAG TGGCTCCATT GTGTTGAACG GGCGGGATAT TAGCGCCGAA
CCGGTGTTTA AACGGGCGCG GGCTGGTATT GCCTATCTGC CCCAAGAGCC ATCGGTGTTT
CGTAAATTGA CGGTGCGGGA CAATATTTTG TCGATTTTGG AAACCCTGCC CTTGGGCCGG
GAGAAGCGTC TGCAAAAGTT GGAGTCGCTG ATGTTGGAGT TGGGTGTGGC CCATTTGGCC
CGCACCAAGG GTTACTCTCT TTCGGGCGGC GAGCGCCGCC GGGTTGAGGT AGCGCGGGCG
TTGGCCATTG AGCCCCGCTA TATTCTGCTT GATGAACCCT TTGCCGGGGT CGATCCCTTG
GCGGTGGGGG ATATACAGTC GATCATTCGC CATCTAAAAG AGCGGGGCAT CGGCATATTG
ATCACAGATC ATAATGTACG TGAGACGTTA GGGATCTGCG ACCACTCTTA CATTCTTTCC
GAGGGGCGCG TGCTGGCAAG CGGCGAGCCG AGCAAGGTGG TGGAGGATGA ACGGGTGAAA
AAGATGTATT TGGGTGAAAA TTTTAAACTC TGA
 
Protein sequence
MKSGVNSGQP TSRLESRSLS KRYQGREIVA NVSIGVEPGQ VVGLLGPNGA GKTTTFYMFV 
GLVGPDSGSI VLNGRDISAE PVFKRARAGI AYLPQEPSVF RKLTVRDNIL SILETLPLGR
EKRLQKLESL MLELGVAHLA RTKGYSLSGG ERRRVEVARA LAIEPRYILL DEPFAGVDPL
AVGDIQSIIR HLKERGIGIL ITDHNVRETL GICDHSYILS EGRVLASGEP SKVVEDERVK
KMYLGENFKL