| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_3327 |
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| Symbol | |
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| ID | 4483366 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Magnetococcus sp. MC-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008576 |
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| Strand | - |
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| Start bp | 4144244 |
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| End bp | 4146949 |
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| Gene Length | 2706 bp |
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| Protein Length | 901 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 639724074 |
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| Product | protein translocase subunit secA |
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| Protein accession | YP_867219 |
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| Protein GI | 117926602 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0653] Preprotein translocase subunit SecA (ATPase, RNA helicase) |
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| TIGRFAM ID | [TIGR00963] preprotein translocase, SecA subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCTCCG CAATTGCCCG TAAACTATTT GGCTCCCGAA ATGACCGCTA CCTGCGCTCT
TTGCAACCGC TGGTGGACCG TATCAATGGC TTGGAGGCAG AGTATGAAGC GCTCAGCGAT
TCTGAGCTGA CCGCCATGAC CTATGCATTT AAGGCACGCC TGGAGAAAGG GGAAACCCTG
GATGATCTGC TGCCAGAAGC CTTTGCGGTG GTGCGCGAGG GCAGTAAACG TGTGCTGGGT
ATGCGTCACT ACGATGTGCA GCTTATTGGT GGCATTGTGC TGCATCAGGG TAAAATCTCT
GAGATGAAAA CCGGTGAGGG TAAAACCCTG GTGGCTACCC TGTCGCTCTA TCTGAACGCA
CTGAGTGGCA AGGGTGCGCA TCTGGTGACG GTCAACGACT ATCTGGCCCG CCGCGATGCG
GAGTGGATGG GTAAGCTCTA TCAGTTTTTA GGGTTGAGCG TGGGGGTCAT TATTCACGGT
ATCGAGGACC AACAGCGTAA AGCGGCCTAC AATGCCGACA TTACCTATGG TACCAACAAT
GAGTTTGGCT TCGATTATCT GCGGGATAAT ATGAAGTTTT CACTGGAAGA GATGGTGCAG
CGCCCCCTGA ACTATGCCAT CGTGGACGAG GTGGATTCAA TCTTGGTGGA TGAAGCCCGT
ACCCCCTTGA TTATCTCCGG CCCCACCGAA GACAGCACCG ATAAATATTA TAAAGTGGAT
CGGCTTATTC CTCAGTTGGA AAAAGAGCGG CACTATACTT TGGACGAAAA ACAGCGCTCC
GTTACCTTTA CCGAAGAGGG CAATGAGCAG ATTGAACAGC TCATGCGCCA AGCGGGGCTG
CTGCGTGACG GGGATCTGTA CGATCTGCAC AATATCGAGA TGGTGCACCA CGTTAACCAA
GCCCTCAAGG CCCACGCCAT GTTTGAGGTG GACCGGGACT ATATTGTTAA AGATGGCCAA
GTGGTCATTA TTGACGAATT TACGGGACGC ATGATGCCGG GACGTCGTTA CTCGGACGGT
CTGCACCAAG CGTTGGAGGC CAAAGAGCAG GTGGTGATTC AAAACGAGTC CCAAACCCTT
GCTTCGATTA CCTTCCAGAA CCTATTCCGT CTTTATAACA AACTGGCGGG CATGACCGGT
ACCGCCGATA CAGAGGCGGC GGAGTTCCAA TCCATCTATA ATCTGGAGGT GGTGATTATC
CCCACCAACC GGGATATGGT GCGCATCGAC CGCGACGATA TGGTGTTCCG CACCTTGGAA
GAGAAGCTCA AAGCGGTGGC CGAAGATATT AAGGTCAGTT ATGAAAAGGG CCAGCCAGTG
CTGGTGGGGA CGGTCTCCAT TGAAAAATCG GAGATGGTCT CGCACTTTTT GAAAAAGCTG
AAGATCCCCC ACGAGATTCT GAACGCCAAA CACCATGAGC GCGAGGCGGA AATTGTCGCC
CAAGCGGGAC GCCCCCGGGC CGTGACCATC GCCACCAACA TGGCCGGTCG TGGTACCGAT
ATTCAGTTGG GCGGCAACTT GGAGATGCGC CTGAAAAAAG AGATCGATCC CGAGGCGAGC
CCAGCCGAGC GCACCCAGCA GGAAATTCAG ATCCGCACCG AGTATGAGCA GGATAAAGCG
CTGGTGCTGG CTTCGGGCGG TCTGCACATT ATTGGTACCG AGCGGCATGA ATCCCGCCGC
ATTGACAACC AGTTGCGGGG CCGGGCCGGG CGTCAGGGTG ATCCGGGTTC GAGCGGCTTC
TACCTGAGCT TGCAGGATGA TCTTATGCGC ATCTTTGGTT CGGAGCGCAT GGATGGCATG
TTGAAAAAAC TGGGCTTGCA GGATGGCGAG GCCATTGTGC ACCCCTGGAT CAATAAAGCG
GTGGAGTCGG CCCAGAAAAA GGTTGAGGGT CGCAACTTTG ACATTCGTAA AAACCTGCTC
AAATTTGATG ATGTCATGAA TGAGCAGCGC AAGGTGATCT ACGATCAGCG TAAGGAGTTG
ATGGAGAACG AGGATATTCG TGATTTCATC GACGAAATCC GGGAAGAGGT GGTCCATGCT
TTGGTGGATA GTCACCTCGG GGAAGATGTT TACCCTGAAG AGTGGGACGC CAAAGGCTTT
AGAGAGGCGA TGCTCAACCA GTTTAATCTG GACCTGAATG TGGAGTCGTG GAAGCATGAA
GAGGGGGTCA CGCATCTGGT TGCCAAGGAG CGCGCCATGG CCGCCGTGAA AGCCTATAGT
GAGGCCCGCG AGGCCCGTTT AGGCCCGCCC TTGATGCGTT ATTTGGAAAA ATCCATCATG
TTGCAGGTGC TTGATACGCT GTGGAAAGAG CATTTGCTCA ACATGGACCA TTTAAAAGAG
GGCATTCATC TGCGTGGTTA TGCCCAGAAG GACCCGTTGA ACGAATATAA GCGCGAGGCC
TTTCAGTTAT TCAGCATGCT GCTGCAACGC ATCCGTGAAG AGGCCATTGA GTTTTTGGGC
AAGGTAGAGG TGCAGCAACC GGAAGAGGTG GCCGCCTATG AGGCGGAGCT GGCCGAGGCG
CGTAATCAGC AGATGAGTCT TAACCATCCC GAGAGTGGCA GTTGGGGGGG GGAGGGTGAG
GGTCCATCCA GTGAGGGTGC CCCCCATCTT CCTTTTAAGC GGGATGGGGA GAAGGTTGGG
CGCAATCAAG CGTGCCCCTG TGGAAGTGGT AAGAAGTATA AGCAGTGTTG TGGTAAACTC
AGTTAG
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| Protein sequence | MFSAIARKLF GSRNDRYLRS LQPLVDRING LEAEYEALSD SELTAMTYAF KARLEKGETL
DDLLPEAFAV VREGSKRVLG MRHYDVQLIG GIVLHQGKIS EMKTGEGKTL VATLSLYLNA
LSGKGAHLVT VNDYLARRDA EWMGKLYQFL GLSVGVIIHG IEDQQRKAAY NADITYGTNN
EFGFDYLRDN MKFSLEEMVQ RPLNYAIVDE VDSILVDEAR TPLIISGPTE DSTDKYYKVD
RLIPQLEKER HYTLDEKQRS VTFTEEGNEQ IEQLMRQAGL LRDGDLYDLH NIEMVHHVNQ
ALKAHAMFEV DRDYIVKDGQ VVIIDEFTGR MMPGRRYSDG LHQALEAKEQ VVIQNESQTL
ASITFQNLFR LYNKLAGMTG TADTEAAEFQ SIYNLEVVII PTNRDMVRID RDDMVFRTLE
EKLKAVAEDI KVSYEKGQPV LVGTVSIEKS EMVSHFLKKL KIPHEILNAK HHEREAEIVA
QAGRPRAVTI ATNMAGRGTD IQLGGNLEMR LKKEIDPEAS PAERTQQEIQ IRTEYEQDKA
LVLASGGLHI IGTERHESRR IDNQLRGRAG RQGDPGSSGF YLSLQDDLMR IFGSERMDGM
LKKLGLQDGE AIVHPWINKA VESAQKKVEG RNFDIRKNLL KFDDVMNEQR KVIYDQRKEL
MENEDIRDFI DEIREEVVHA LVDSHLGEDV YPEEWDAKGF REAMLNQFNL DLNVESWKHE
EGVTHLVAKE RAMAAVKAYS EAREARLGPP LMRYLEKSIM LQVLDTLWKE HLLNMDHLKE
GIHLRGYAQK DPLNEYKREA FQLFSMLLQR IREEAIEFLG KVEVQQPEEV AAYEAELAEA
RNQQMSLNHP ESGSWGGEGE GPSSEGAPHL PFKRDGEKVG RNQACPCGSG KKYKQCCGKL
S
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