| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_3311 |
|---|
| Symbol | |
|---|
| ID | 4480675 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Magnetococcus sp. MC-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008576 |
|---|
| Strand | + |
|---|
| Start bp | 4128780 |
|---|
| End bp | 4129952 |
|---|
| Gene Length | 1173 bp |
|---|
| Protein Length | 390 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 639724061 |
|---|
| Product | glycosyl transferase, group 1 |
|---|
| Protein accession | YP_867206 |
|---|
| Protein GI | 117926589 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0438] Glycosyltransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTTAACC GGCCCCCCAT TCTGGCGCTT GCCCCCCACA GTTGGCACGA CCGCTGGCTC
AGCCGGCAGC AGTTAATGAG CCGTCTGGGT GGCCGGGGTT GGCCCGTCAC CTACAGCTAT
GGTCCCCTCA ATGTGTGGCA GCGCGAAAGC CCCCTGTGGC AACAGGCCGG TTGGTTGGGG
GGGGTTGAAC AGGTTGACCA TGTGCAGGTG GATCAACCGG GCCGCTGGTT TCCCGCTTGG
CAGCGCTACC CCTGGTGGGA TCATGTGGCG CTGCGTCTGC ACGCCCAACG CATGCAGGCC
CTTATGGGGC ATGCCCAGGC TGACCGACAG ATTCTTTTTC TGTTTCATCC CCGCTTTTGG
CCCTACGTAG AACGGCTACA GCCGCGCTAT GTGGTCTACC ATATCTATGA TGTCTTTTCC
GTTATGGATA ACTGGAGCCC GCAAATGGAT CACTACCAGC AGCAGTTGGT GGAGCGGGCC
GATCTGATTA CCACCTCTTC CCAAGGCATG CTGGAGCAGC TCCCCACGCC GGGCCCGCAA
AAGGCCAAAT TGCTCAATAA TGGCGCCGAT CCCCGCCCCT TTATCGAGGC CGATGGCTGC
CCCTGCCCGG CAGATTTGGC CATGATCCCC GGCCCCCGCA TTGGTTATGT GGGCACGGTC
AATGCCAAAT TGGATCTGGA GATGATCTTG TATGTCGCCA GCCGCCACCC CCACTGGCAC
TGGGTGTTTA TTGGCCCGGT CATGTTGGAA GGCGAGCAGG CCAAGCAGGC TAAAGCGCTG
TGGCAGCAGT GCTGCGCCCT GGATAATGTG CATCTGTTGG GGGCCAAACC CAGGCAGGCG
GTACCTGCCT ATGTACAGCA TATGGATGTC AACACCATCT GTTACCGCAT CCGCCCCGAC
GATTGGGTAA TCCATGGCTA CCCGGTCAAA CTGCATGAAT ATTTGGCCAC CGGCAAACCG
GTGGTAGCCG CAGCACAAAG TGCGGTTAAG GATCAGTTTA GCCATGTTGC CGCCATCGCC
CAGCACCCCC AACAGTGGGC CGATGCCCTG CAAGCCGCCC TCACCAACGG CGGCGTGGGC
ACCCCCCAGA CCCGCCGACA GGTGGCCCTG CTCAACACCT GGGACCAACG CACCAGCACC
CTGGAAAATT GGCTGCTGGA AATGTTGGCG TAG
|
|---|
| Protein sequence | MLNRPPILAL APHSWHDRWL SRQQLMSRLG GRGWPVTYSY GPLNVWQRES PLWQQAGWLG
GVEQVDHVQV DQPGRWFPAW QRYPWWDHVA LRLHAQRMQA LMGHAQADRQ ILFLFHPRFW
PYVERLQPRY VVYHIYDVFS VMDNWSPQMD HYQQQLVERA DLITTSSQGM LEQLPTPGPQ
KAKLLNNGAD PRPFIEADGC PCPADLAMIP GPRIGYVGTV NAKLDLEMIL YVASRHPHWH
WVFIGPVMLE GEQAKQAKAL WQQCCALDNV HLLGAKPRQA VPAYVQHMDV NTICYRIRPD
DWVIHGYPVK LHEYLATGKP VVAAAQSAVK DQFSHVAAIA QHPQQWADAL QAALTNGGVG
TPQTRRQVAL LNTWDQRTST LENWLLEMLA
|
|---|
| |