Gene Mmc1_3288 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmc1_3288 
Symbol 
ID4482258 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMagnetococcus sp. MC-1 
KingdomBacteria 
Replicon accessionNC_008576 
Strand
Start bp4102634 
End bp4103143 
Gene Length510 bp 
Protein Length169 aa 
Translation table11 
GC content46% 
IMG OID639724039 
Producthypothetical protein 
Protein accessionYP_867184 
Protein GI117926567 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2856] Predicted Zn peptidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0186314 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTTCAAC CTGCGCAAAT ATCAAAACAA AAAATTGAGG AGCTAGCTGA GCAGTTCGCA 
CAGGTTGTTG GCTACCAGCC AGGCGGTGAC CTTCGTGAAA TCATTGAAAA CAAACTTGGC
GGCGAGCTGA AATATGCTGA CGCATCTGAA TGGTTTAATA CCGAAGATGG TTCAATAAAG
GTGCGTGCAC GCAAAGATTT TACGATCACC CTAGCCAATT TTACTGGGCC TCTGAGAAAT
CGCTTCACTA TTGCCCATGA GCTTGGGCAC TACGTAATCC ACTCTCGTAT GGGTGAAGTT
CCTATTGAAG CTCCTCGAAA AGGGCGCTCA GTTGCCGAGA GACAAGCTGA TGCGTTTGCT
GCAGCTTTTT TAATGCCCAA GGAGCAGTTT CTAACCTTCT TTGATTCAAT GGGTGAAAAT
CCAGATCTAG AGCTAATTGC TGGGCATTTC CGAGTGTCAA AATCCGCTGC AAATTACAGG
GCCCAGGAAT TTGGCCACAC AATCGATTGA
 
Protein sequence
MVQPAQISKQ KIEELAEQFA QVVGYQPGGD LREIIENKLG GELKYADASE WFNTEDGSIK 
VRARKDFTIT LANFTGPLRN RFTIAHELGH YVIHSRMGEV PIEAPRKGRS VAERQADAFA
AAFLMPKEQF LTFFDSMGEN PDLELIAGHF RVSKSAANYR AQEFGHTID