Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmc1_3288 |
Symbol | |
ID | 4482258 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Magnetococcus sp. MC-1 |
Kingdom | Bacteria |
Replicon accession | NC_008576 |
Strand | + |
Start bp | 4102634 |
End bp | 4103143 |
Gene Length | 510 bp |
Protein Length | 169 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 639724039 |
Product | hypothetical protein |
Protein accession | YP_867184 |
Protein GI | 117926567 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG2856] Predicted Zn peptidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.0186314 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTTCAAC CTGCGCAAAT ATCAAAACAA AAAATTGAGG AGCTAGCTGA GCAGTTCGCA CAGGTTGTTG GCTACCAGCC AGGCGGTGAC CTTCGTGAAA TCATTGAAAA CAAACTTGGC GGCGAGCTGA AATATGCTGA CGCATCTGAA TGGTTTAATA CCGAAGATGG TTCAATAAAG GTGCGTGCAC GCAAAGATTT TACGATCACC CTAGCCAATT TTACTGGGCC TCTGAGAAAT CGCTTCACTA TTGCCCATGA GCTTGGGCAC TACGTAATCC ACTCTCGTAT GGGTGAAGTT CCTATTGAAG CTCCTCGAAA AGGGCGCTCA GTTGCCGAGA GACAAGCTGA TGCGTTTGCT GCAGCTTTTT TAATGCCCAA GGAGCAGTTT CTAACCTTCT TTGATTCAAT GGGTGAAAAT CCAGATCTAG AGCTAATTGC TGGGCATTTC CGAGTGTCAA AATCCGCTGC AAATTACAGG GCCCAGGAAT TTGGCCACAC AATCGATTGA
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Protein sequence | MVQPAQISKQ KIEELAEQFA QVVGYQPGGD LREIIENKLG GELKYADASE WFNTEDGSIK VRARKDFTIT LANFTGPLRN RFTIAHELGH YVIHSRMGEV PIEAPRKGRS VAERQADAFA AAFLMPKEQF LTFFDSMGEN PDLELIAGHF RVSKSAANYR AQEFGHTID
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