Gene Mmc1_3285 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmc1_3285 
Symbol 
ID4482255 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMagnetococcus sp. MC-1 
KingdomBacteria 
Replicon accessionNC_008576 
Strand
Start bp4101028 
End bp4101426 
Gene Length399 bp 
Protein Length132 aa 
Translation table11 
GC content52% 
IMG OID639724036 
Producttype IV pilus assembly PilZ 
Protein accessionYP_867181 
Protein GI117926564 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000151513 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACACAG ACACCCCCCA TGATCGACGC ATTGCCGAGC GTGCTGAACA CCCCAATGGG 
CGACGCCAGT ATACCCGTGT GGAATATCGT CACGCCATAC TGCTCAAGGA TGCCTCGGGG
CAGAGCTACG ATGGCTCTTT CAACGATATT AGCCTTAAAG GCATGCTGTT TCTTGCAGAA
CATCTGCCCG AAGCTGGAAC AGAGGTAGGT GGTGAGCTTC TATTGGGGGA TGTGGTGATT
GAGCTGCATG GCACTGTGGT ATTGAGTCAA GCCGATCGGG GTGCGGCCAT TCGCTTTATG
GATATTGATT TAGAATCCTT TAGCCACCTG CGCACTCTGG TTTCATTAAA TCTAGGGGAT
GCGGAACGCA TTGACCGGGA GCTGTTTGAT AGCCTATGA
 
Protein sequence
MNTDTPHDRR IAERAEHPNG RRQYTRVEYR HAILLKDASG QSYDGSFNDI SLKGMLFLAE 
HLPEAGTEVG GELLLGDVVI ELHGTVVLSQ ADRGAAIRFM DIDLESFSHL RTLVSLNLGD
AERIDRELFD SL