Gene Mmc1_3276 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmc1_3276 
Symbol 
ID4482195 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMagnetococcus sp. MC-1 
KingdomBacteria 
Replicon accessionNC_008576 
Strand
Start bp4092337 
End bp4093521 
Gene Length1185 bp 
Protein Length394 aa 
Translation table11 
GC content57% 
IMG OID639724027 
Productaminotransferase 
Protein accessionYP_867172 
Protein GI117926555 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0436] Aspartate/tyrosine/aromatic aminotransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGGCGA TGCAGTGGGC AAAAAAAATA GCGCAAATTC AGCCGTTTTA TGTGATGGAG 
ATGCTCGCAA AAGCCAAAGC GTTGGAGGCC CAAGGCCGCC ATATTGTGCG CATGGAGGCC
GGTGAGCCCG ATTTTACCAC CCCCGCTCCC GTGTTGGCGG CGGCCCGGCT GGCGTTGGAT
GAAGATCGCA CCCGCTACAC GCCATCCCTG GGCATACCGG AGCTGCGGGC GGCCATCGCG
CAGTGGTATC AAACCCGTTA TGGGGTGGCG GTGTCACCCC AGCGGGTGGT GGTAACGCCG
GGTACCTCGG GGGCGTTTCA ACTGATCTTT GGTCTGCTGT TGGATGCCGG GGACCGGGTG
GCGCTCTCCG ATCCGGGTTA TCCCTGCTAC CCAAACATGG TGCGCTTTGT TAATGGCGAG
CCGGTGGCGA TCCCGGTTTC ACCCCAGAGC CACTATCAAC TCTCTGCCGA GTTGCTGGTG
GAACAGTTGG CTCCCCAGCA TGCTCGTGGT TTAAAGGCGG CGATTGTAAC CTCCCCCTCC
AACCCCACGG GCACCTTGAT TCCCGATGCC CAGATGCAAA CCCTGTTGAG TGCCGTAGAG
GGGCAGGGGG GGTATGTGAT CTCCGATGAA CTCTACCACG GCATTACCTA TGGGTGTAAG
GCGCGTACGG CCCTGGAGTT TTCTGAAAAT GCTATTGTTA TTAATGGCTT TTCAAAATAT
TTTGGGATGA CAGGCTGGCG TTTGGGGTGG ATGATTGTAC CCCCTTCGGC GGTACGGGGC
ATTGAGATGT TATCACAAAA TCTCTTTATT TCGGCCCCCA CCATTGCTCA GTATGCGGCG
CTACAAGCGT TTGATTGCGC TGGGGCTATG GATGAACAGG TAGCCCGCTA CGATCTTAAC
CGGCGCTACC TGTTAACGGC GTTGCCCAAG TTGGGTTTTG GCATTGGGGT TGAGCCCAAG
GGGGCCTTTT ATATCTATGC GGATGCCACA CAGGTTTTAA GCAAAACCGG TCTGGCCAAT
GGCGAGGCGC TCTGTATGGC GGCCCTTGAG CAGGCGGGTT GCGCCTTTAC CCCAGGGTTG
GATTTTGGCC GTTACCGCAG CCATGAACAT GTGCGGTTCT GTTATGCAGC GGAGTTGGCG
CAGCTAAAAA TCGCCATGGA GCGGCTCGCA GCGTGGTTGG GTTAA
 
Protein sequence
MMAMQWAKKI AQIQPFYVME MLAKAKALEA QGRHIVRMEA GEPDFTTPAP VLAAARLALD 
EDRTRYTPSL GIPELRAAIA QWYQTRYGVA VSPQRVVVTP GTSGAFQLIF GLLLDAGDRV
ALSDPGYPCY PNMVRFVNGE PVAIPVSPQS HYQLSAELLV EQLAPQHARG LKAAIVTSPS
NPTGTLIPDA QMQTLLSAVE GQGGYVISDE LYHGITYGCK ARTALEFSEN AIVINGFSKY
FGMTGWRLGW MIVPPSAVRG IEMLSQNLFI SAPTIAQYAA LQAFDCAGAM DEQVARYDLN
RRYLLTALPK LGFGIGVEPK GAFYIYADAT QVLSKTGLAN GEALCMAALE QAGCAFTPGL
DFGRYRSHEH VRFCYAAELA QLKIAMERLA AWLG