| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_3273 |
|---|
| Symbol | |
|---|
| ID | 4482191 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Magnetococcus sp. MC-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008576 |
|---|
| Strand | + |
|---|
| Start bp | 4088146 |
|---|
| End bp | 4089324 |
|---|
| Gene Length | 1179 bp |
|---|
| Protein Length | 392 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 639724023 |
|---|
| Product | glycosyl transferase, group 1 |
|---|
| Protein accession | YP_867169 |
|---|
| Protein GI | 117926552 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0438] Glycosyltransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAGCAAC CACACTGTCG CATTTTGCAT GTTATACCCA AGCTTAATAC GGGCGGCAGT
CAATGGATGC TGTTTAAATT GCTGCATGCG GGGCAGGCTA GCCCAGAGTT TGATCAACAG
GTGCTGTGCC TGGGCAAACC GGACCGGTTA AGCCCAATTT TTGCCGAAGC GGGCATTAAG
GTCGAGCATT TGGGCATGGA TCTAAAGCGT CCCAACCCAT GGGTGATTTG GCGTTTTGTG
CAATGCATTC GACAGGCTCG ACCGGATATT GTGGTGAGTT GGCTGTTTGT GGCGGATTTT
CTTACGCTGC TGACACGACC ATGGACGGGC ATTCCACGCT TGATATGCAA TCTACGCACC
TCCTCCCTTT CGCTCAAGAG TTTGGGGGGA CTGGATTATA TTTTGGTGCG GCTGAATCGC
TTTCTCTCTT CCCGCATGGA TGGCATGCTC CACAACGCCC ATGCGGGCAA GCAGCAGTTG
CAGCAGTTGG GCTACACGCC CTCATGGTGG CACTATATAG CCAATGGGTT TGATTTGGAA
AAACTTCAAC CCAACCCCCA CGCACCGCGC CGCTTAAGGG AGCAACTCAA GCTACCAGAG
GGGGCTTTTC TGTTTGGCTG TTTTGCCCGT TATCACCCTT GTAAGGATCA TAAAAGCCTG
TTGCACGCCT TTCAATGGTT ACACCAGCGT CAGCCACACG CCTATCTGCT GCTGGTGGGG
CGCGGGCTTG ACTGTGCAGA GATGGACCAG TTGGTGGATC GGTTGCAGGT ACAGGATCAT
GTGCTGCGTT TGGCGGAGTT GACAGATGTG GGGCAGTGGC TCCCTGGATT GGACGCGGCG
GTATTGGCCT CCTCTGAGGG GGAAGGATTT TCCAATTTTA TTGGGGAGGC GATGGCCTGC
GGCGTACCGT GTGTCTCAAC GGATTCTGGG GATCATCGTC TGGTTATTGG CGACACGGGC
AGCATCGTGC CTGCTGGCGA TGCCCACGCC CTGGGGGAGG CCATGCAGCG GATGCTGCTA
TTGAGCCCGC CAGAGCGGCA GGCTCTTGGT GTGCGGGCGC GTGAGCAGAT TGTGGGCCAT
TTTGATATTG ATCAGGTTGT GACAGCCTAT CATCTTTGTT ACCAAGCGCT CATGGCAGGG
AGCCCCCCTG AAACCAACCA ACCGCCCAAG GAGAGCTGA
|
|---|
| Protein sequence | MEQPHCRILH VIPKLNTGGS QWMLFKLLHA GQASPEFDQQ VLCLGKPDRL SPIFAEAGIK
VEHLGMDLKR PNPWVIWRFV QCIRQARPDI VVSWLFVADF LTLLTRPWTG IPRLICNLRT
SSLSLKSLGG LDYILVRLNR FLSSRMDGML HNAHAGKQQL QQLGYTPSWW HYIANGFDLE
KLQPNPHAPR RLREQLKLPE GAFLFGCFAR YHPCKDHKSL LHAFQWLHQR QPHAYLLLVG
RGLDCAEMDQ LVDRLQVQDH VLRLAELTDV GQWLPGLDAA VLASSEGEGF SNFIGEAMAC
GVPCVSTDSG DHRLVIGDTG SIVPAGDAHA LGEAMQRMLL LSPPERQALG VRAREQIVGH
FDIDQVVTAY HLCYQALMAG SPPETNQPPK ES
|
|---|
| |