| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_3269 |
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| Symbol | |
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| ID | 4482187 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Magnetococcus sp. MC-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008576 |
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| Strand | - |
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| Start bp | 4077836 |
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| End bp | 4079917 |
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| Gene Length | 2082 bp |
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| Protein Length | 693 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 639724019 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_867165 |
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| Protein GI | 117926548 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG3914] Predicted O-linked N-acetylglucosamine transferase, SPINDLY family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.306934 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACACTGG AAGAGGCCTT TCGACAGGCG GCACAATGGC AGCAAGAAGG GCTGTTGGAG
CAGGCAGAAG CCCTCTATGG ACAGATTTTG CAAGTGGCCC CTGAACATCC GGTGGTGCGC
TACCACATGG CCTTAATCAG CCAACAGCGT GGCGACCAAG GGCCGTTGGA AGAGCGCTTG
CAGGCGGTAT TGGCGGTGGC CCCAGAACAC CATGATAGCC ACCGTCTGCT GGGCATGCTC
TACACCGAGC AGCAACAGCT TGAGCGGGGG GCGTACCACT TTGAACAAGC GCTCAAGGGG
GCGGATCAAC CCCTAACCCT GTCTGTCAAC TATGGCTACA ATCTCTTGCG CCAGGAGCGT
TTGCAGGAAG CCCAACAGTG GTTTGAGCGG GCCTTGGCCC AGCAGCCCAT GGATGGTGCC
TGGGATGGCT TGGCAAAAGT GGCGCGGGCG CGGGGGGATC TGGAGGCGGC CAATGACGCC
TATAAGCAAG CGCGAGCACT CAACCCGGCG TCCATCAATC ATCTCTATAA TCATGCCCTT
TTGCTCAACC AAATGGAGCA GCATGAGCAA GCGGAGGCGC TTTTTTTAAC GGTGTTGGCG
CAGCGTCCCC GCATGGCGGT GGCGCACAAT GGCTATGGGG TGTTGCTGCG CAAGACCAAG
CGCCATCCAC AGGCGCAACA CCACTTTGAG CGGGCCTTGC AAGAGGATGC GACGCTGGTG
GCGGCCCACA ATAATTTGGC CAACACGCTG GTGGATATGG GACAAGCGGA TGCGGCGATT
GCGCATTTTC GGGCGGCTTT GGCGTTGGAG GAAAACCGCG AAATCCGTAG TAATATGCTC
ATGGCACTCT CGTATAGCAG CCACTACCGT GGTGAGGATC TCTATCAAGA GTTGCGTGTA
TGGAACAAAC ATCATGGGGG GGGAGAAACA ACACCCTCTT TTCCCAATGA TGCCGATCCC
CAGCGCCGGC TACGGGTGGG GTATTTGAGT GGGGATCTGT GTCAGCATCC CTTGGGTTTT
TTTACCCTGC CGCTGCTACA AAACCACGAT AAGCAAGCGG TCGAGAGTTT TGTCTATGCC
AATATCCCCA AACAGGATTG GTTGACCGAG GCGTGCCGTC AACAGGTTGA CCACTGGTAT
GATTTGGCCG GTCAGCCCGA TGGGGTGGTG GCTCAGCAGA TTGCCCAGGA CCAGATTGAT
GTGCTGGTGG ATCTCTCGGG TCATACTCGG GGCAACCTCA TTGGGCTGTT GGTCAAACGT
AGTGCACCGG TACAGTTGCT GGGGGGGGGC TGTTACTGCT CCAACGGCAT CGACACCATG
GATGGGGTGT TGGCGGATGC CTATCAGGTC CCCGATGCTT TGGCGTCGAC CTTTAGTGAA
CCATTAATTC GTCTACACGG ATATCTAAAT ACCGTCTATG CCCCACCCCC ATATCTGCCC
CCCGTGGCCC CATTGCCTGC CTTAGAGAAG GGGCACATCA CCTTTGGCTG TTGCAATAAT
TTGGCTAAAT TTAATCCAGC GGTGGTGGCC TTGTGGAGTA CGTTGCTCAA ACGTCTGCCC
CATGCCAAGC TGTTGTTGCG CACCTTTGCC CTGAATGGCG CCGAGACGCG GGCTTGGGTG
TGTCAGCAGT TTGCGCAACA CGGCATTGAG GCCCAGCGGC TCGTGTTGCA CGGCGGGGTG
AGCCACGAGC AACTTTTACA AGGGTATGGG GAGATGGATA TCGCCCTAGA TCCGTTTCCC
TACTCGGGGG GGTTGACCAC GGTAGAGGCG CTGTGGATGG GCGTACCGGT GGTGGCGCTG
CATGGGGATC GCATGGCGGG GCGTCACTCG GTGGGTTACC TTAACTGTGT GGGGTTGGGC
GCGTGGGCGG TTAAAAATGA GCAGGCGTAT GTGGAACACG CGGTGGCCAT GGCCCAGGAT
CTTGCGGGTT TGGCGGCGCT GCGCCAAGCT TTGCGTGGCC GGATGGAGGC TTCGCCGGTT
GCCGATGGCG CGGGTTATAC CCGTATGGTG GAGGGGGTCT ATCGCACCCT CTGGCAGCGC
TGGTGCCAAA GCCGCACGAG GGTAAAACCA ACGGTCATGT GA
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| Protein sequence | MTLEEAFRQA AQWQQEGLLE QAEALYGQIL QVAPEHPVVR YHMALISQQR GDQGPLEERL
QAVLAVAPEH HDSHRLLGML YTEQQQLERG AYHFEQALKG ADQPLTLSVN YGYNLLRQER
LQEAQQWFER ALAQQPMDGA WDGLAKVARA RGDLEAANDA YKQARALNPA SINHLYNHAL
LLNQMEQHEQ AEALFLTVLA QRPRMAVAHN GYGVLLRKTK RHPQAQHHFE RALQEDATLV
AAHNNLANTL VDMGQADAAI AHFRAALALE ENREIRSNML MALSYSSHYR GEDLYQELRV
WNKHHGGGET TPSFPNDADP QRRLRVGYLS GDLCQHPLGF FTLPLLQNHD KQAVESFVYA
NIPKQDWLTE ACRQQVDHWY DLAGQPDGVV AQQIAQDQID VLVDLSGHTR GNLIGLLVKR
SAPVQLLGGG CYCSNGIDTM DGVLADAYQV PDALASTFSE PLIRLHGYLN TVYAPPPYLP
PVAPLPALEK GHITFGCCNN LAKFNPAVVA LWSTLLKRLP HAKLLLRTFA LNGAETRAWV
CQQFAQHGIE AQRLVLHGGV SHEQLLQGYG EMDIALDPFP YSGGLTTVEA LWMGVPVVAL
HGDRMAGRHS VGYLNCVGLG AWAVKNEQAY VEHAVAMAQD LAGLAALRQA LRGRMEASPV
ADGAGYTRMV EGVYRTLWQR WCQSRTRVKP TVM
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