Gene Mmc1_3265 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmc1_3265 
Symbol 
ID4482183 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMagnetococcus sp. MC-1 
KingdomBacteria 
Replicon accessionNC_008576 
Strand
Start bp4072393 
End bp4074666 
Gene Length2274 bp 
Protein Length757 aa 
Translation table11 
GC content56% 
IMG OID639724015 
ProductDNA repair ATPase-like protein 
Protein accessionYP_867161 
Protein GI117926544 
COG category[L] Replication, recombination and repair 
COG ID[COG0419] ATPase involved in DNA repair 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCATTC ATAGTATTCA CGGGGAAAAC CTGTTCCGTT TTGCCACGGT GCAGCTCGAC 
AATCTGCCCC ATCGTGGGGT TATTGCCATT GATGGGGCCA ACGAAGCCGG TAAAAGCTCA
CTGCTGGAGC TGCTGCTGCT GGCTCTGTTT GGCCGCACCA GCCGTCTGAA TGATGAAGAG
TTGGCCCGGG CGGTGCGCTG GGGCAGTGAC CAAGCGATGC TTAGCGTGGT GTTTAGCAGC
AACGATCAAC AACGCTATCG GGTGGTGCGC TATCTAAACA GCGAGGGTGT GCAGAGCGCC
AATTTAAGCC TCGCCGAAGA GCCCACCCCC CCCCTGGTTA AAGGGGTAGC CGGGGTAAAC
AGTACCATTG TGCAGCTCAT TGGCATGGAC TATGACACCT TTTTGAGCTG CATCTGCCTA
AGCCAGCAGG GCTCAACCCC CGCCTACGAG CCCCTTTTAT ACCGCATCTC AGGGGTCGCC
CAGTTAGAGC GGGTCGCCGA CGAGCTCTCC GATGAAGTCA TCGACATGGC CACCGACAGC
CAAAACAGCG GCCACCAGAT CGAAAAAATT GAAGAAGAGC TGGAAGATTT GGATGTCATG
GGCAGCTCTT TGGAGACCAT GCAACGGCAG CTCGAAGAAG CCTTTTCCAC CCGTAATGTC
TTGGAAAAAC AGATCCGCCA ACTGCGCAGT TTTTCACTGA CCTTGCAAGA GGCCACCCGC
CAACTGGTGG AGAGCCCCCT GCCCCAACTC GGAGCCAATG ATGAGCTGGG GGTGTGGCAA
AAAGAGCTGG AAGCCATGGA AACCGCCATG GATGGGCTGG ACCGACTCTG CCGGGGCAAC
CCTTTGGGGG TGGATGAAGA TCCCTCCCGT CAACTACGCC CCTTGGTTCA GCGCCGTATT
TCGGCCCTGT CGGAACTCTA TAAATTGATG ACGGAGATCC ACCAGCAAGG GGAGAAGTGG
CGTCTTTGGC TGGCGGAGGA GGAGCCCCTA CACATCCGTT ATGCCGAAGA GCAATCGGGC
GAAACCAGCT ATCCGGTACG CCAAGCCACC TTGCAACGCA AGCGAGAGCA GCAACTGACC
ATGCAGCGCC GTAGCGGCTG GCTGTTTGCC TTGGCGCTCA TACTCTCCAC CGCAACGGTC
ATTCTGTGGT ATATTGCCCA ACTGGCGTTG GTAAATGACC CTGGCATCAC CACCTCTGAA
CATGGCCTAT TGATGGCGCT CCTGGGCAAC CCCCAACAGA TGAGCCAGCG TTTTATCGCA
CTGCTCACCC TAGAGGGCAG CATTGCGTTA CTGGCTGGGG CTGGAGTGTG GTTTTACACC
ACCGCCAAAC GCCGGGTAAG CAAACAACTG CATGCCCTAG AGCAACAGGC TAAATATGGT
CGTGACCAGT ATAAGCGCTT AAATACCCTG CTCAAACGCC CCATGCTCTC CCGTTTTCTG
GAATCCATTA CCCTAACTGA CGCCCCCTGG TCAGAGCAGC TTAACCGCTG GTTTGCCAGT
ATGGGGGATA TGTTTATCGA GCCCAGCCAA TCCCGCGAAC CCCACCAGAG CTTGCGGCAC
AACCTGGATG AAGTAGGCGA TAAACTGCTG CATGATCGGC AACAGTTGGA ACATCGCTTA
GAACGGGCAC TTACCGAGCA TGAGAGCCTC TCGGACCGGC TGGATCAACT GGATCGCGCC
ATTCGCGAAG AGAATGAACG TCGCGAGCGG GATGTGATTT TACGTCAAGA GCTACAAGCG
TGCCACGCCA CCCACCGCCA GCAACGCCAC GGGGTGCGGG TGCGGGAGAT CTCCTTGACC
CTGCTACAGG GTGCCCAGAA GGCGTGTCAT CAACGCTTTC AACAAGAGCT TAAACGCTCT
CTCTCGGCGC TGACCCCCCA CTTTACCGGG GGTCACTATC GCCATTTGGA GTTGGATGAA
GAGATGCAAC TACAAACCCG CAGCACCGAC CACCATGGTC TGGTGGCGGT GGCCGATCTG
AGCAGCGGCA CGCAACGTCA GATGCAGTTG GTGCTTAGAC TCACCTTGGC GCGGGCCATG
GCCGCTTACA TCTCTGCCCC AGAGCAGTTG ATAGTATTGG ATGAACCGTT TGCTTTTTTT
GACCATTTCC GCACACAGCA GGCAATGCAC GCCCTGTGTC AGTTACAGGA GCCTATCACC
CAAATTTGGG TGGCAACACA AACTTTTCCT GAAGTGCTTG ATGAAAAGGG GCTAATACGC
ATAACCTGTG ATCAGGATCA AGAGAGCCTA ATCTTTAATG GGAAGCGTTC ATGA
 
Protein sequence
MIIHSIHGEN LFRFATVQLD NLPHRGVIAI DGANEAGKSS LLELLLLALF GRTSRLNDEE 
LARAVRWGSD QAMLSVVFSS NDQQRYRVVR YLNSEGVQSA NLSLAEEPTP PLVKGVAGVN
STIVQLIGMD YDTFLSCICL SQQGSTPAYE PLLYRISGVA QLERVADELS DEVIDMATDS
QNSGHQIEKI EEELEDLDVM GSSLETMQRQ LEEAFSTRNV LEKQIRQLRS FSLTLQEATR
QLVESPLPQL GANDELGVWQ KELEAMETAM DGLDRLCRGN PLGVDEDPSR QLRPLVQRRI
SALSELYKLM TEIHQQGEKW RLWLAEEEPL HIRYAEEQSG ETSYPVRQAT LQRKREQQLT
MQRRSGWLFA LALILSTATV ILWYIAQLAL VNDPGITTSE HGLLMALLGN PQQMSQRFIA
LLTLEGSIAL LAGAGVWFYT TAKRRVSKQL HALEQQAKYG RDQYKRLNTL LKRPMLSRFL
ESITLTDAPW SEQLNRWFAS MGDMFIEPSQ SREPHQSLRH NLDEVGDKLL HDRQQLEHRL
ERALTEHESL SDRLDQLDRA IREENERRER DVILRQELQA CHATHRQQRH GVRVREISLT
LLQGAQKACH QRFQQELKRS LSALTPHFTG GHYRHLELDE EMQLQTRSTD HHGLVAVADL
SSGTQRQMQL VLRLTLARAM AAYISAPEQL IVLDEPFAFF DHFRTQQAMH ALCQLQEPIT
QIWVATQTFP EVLDEKGLIR ITCDQDQESL IFNGKRS