| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_3261 |
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| Symbol | |
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| ID | 4481242 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Magnetococcus sp. MC-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008576 |
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| Strand | - |
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| Start bp | 4066770 |
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| End bp | 4069505 |
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| Gene Length | 2736 bp |
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| Protein Length | 911 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 639724011 |
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| Product | DNA polymerase I |
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| Protein accession | YP_867157 |
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| Protein GI | 117926540 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0749] DNA polymerase I - 3'-5' exonuclease and polymerase domains |
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| TIGRFAM ID | [TIGR00593] DNA polymerase I |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.155363 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTACCC AACGTCTGTT TTTGATTGAT GGCTCTGGCT ACCTCTATCG TGCCTTTTTT
GGGGTGCGTA ATCTCACCCG GCGGGATGGT TTTCCTACCA ATGCCATCTT TGGGTTTATC
AAGATGTTGC GTAAGGTGAT TGAGGATGAG AAACCCGATT TTGTGACCAT CGCCTTTGAT
ACCAAGGCCC CCACCTTTCG CCATACCATG GATGCGCAAT ACAAAGCCAA CCGCAAACCC
ATGCCCGATG AGTTGCGGGT GCAGATTCCC GTGATCCACG ATGTGATTGA TGCCTTTAAC
ATTCCCCGTA TCGCCTTGGA AGGGTATGAG GCCGACGATA TTATCGGCAC CTTTGCCCGT
TTGGGTTGCG CGGCTGGGGT GGAGGTGGTG GTGGTCTCTG GGGACAAAGA TTTGATGCAG
CTCATCACCC CCCAAGTCAA AATGTTTGAT GGCAGCAAAG ATAAATGGTA TGGCCCCGAG
GATGTGGTGG AGAGTTGGGG GGTTGCCGCG GAGCGGATTC CCGACCTGTT GGGATTGGCG
GGGGATACCT CGGATAATAT CCCAGGGGTT GGTGGCATTG GTCCCAAGAC CGCCGCTCAG
TTAATCGCCG AATTTGGCAG TTTAGAGGGG GTACTGCATG GGGCCGAGCG CATCAAACAG
CCTAAGCGAC GCACCGCCCT GTTGGAACAA GCCGATACCG CCCGGCGCAG TTTGCAACTG
GCCACCATTA ATCGAGAAGT GCCGCTGCCC TTTGATCTGC AAGGGGCACG CATGCAGCGC
CCCAACTGGG CGAGGTTGCG GGAGATCTAT CAGGATATGA GCTTCGCCAC CCTGGCGCGG
GAGGCGGAAA AACAGCTGCA AGCGCTGGGC AGCGAGGCCG CTCCCTCTAT CCAGATAGAG
ACTCAACCAG AGAGCCTGCC CAACCAGCCC AACTATCAGG TGATTACCAG CGAGGCGGCG
TTTCAGGCAT TCATGGAGCA GCTTAAGGGC CTGCCCCGTT TTGCGGTGGA TACCGAAACC
ACCGACCTGC ACCCCCACAG CGCTGAGCTG GTGGGGATCT CCATCGCGTG GCAGCCGATG
GTGGCCTATT ATATTCCCGT GGGTCATGCC CTGGATGCCG CCCCCGAGGG GCAGTTGCCC
CGTGCTGATG TGTTGGCCGC CCTCAAGCCC CTGTTGGAGA GCCCCGAGAT TGGCAAAACC
GGCCAAAATA TTAAATATGA TTATCAAATC TTCAAGCGCT ACCACATCAC CATGCAGGGG
ATCGAGCGGG ATAGCATGCT CTACAGCTAT CTGCTGTATG GGGCCAACCG GGCACACAAT
CTGGACGCCA TCGCCACCGA GGAGCTGGGA CGCACCACCA TCAAGTTTGA GGATGTGGCG
GGCAAGGGGC GCAAGCGTAT CCGTTTTGAC CAAGTTCCCC TGCATCTGGC CGCCCCCTAT
GCCTGCGAAG ATGCCGAGGT AACGTGGCAA GCGGCGGCGT CGATGGCGCC CAATCTTGAT
CGAGAGCCGG GCCTCAAGCG GCTCTACGAA ACCATTGAGC GCCCCTTGAT CCCCGTATTG
GCGGAGATGG AGTATGCCGG GGTGTTGGTG GACCGGGATG TGCTTTCCAC CATGTCCGCA
GACTTTTCCA AGCGCCGGGC GCGTTTGGTG GAGGAGATTC ACGAATTGGC GGGGGAGGTT
TTTAATGTCA ACTCCACCCA GCAGTTGGGG CATATTTTGT TTGAGAAGAT GGGGATTAAG
GGGGGCAAGC GTACCAAAAG CGGTTTTTCT ACCGATGTCT CAGTGTTGAG CAAGCTGGCC
GATGATGGGG AGAAAATTCC CCAACAGGTG TTGGCTTACC GCAGTTTGAC CAAGTTGCAA
TCCACCTATA CCGATGCCTT GGTGGCGCTT ATCCATCCCT ACACGGGTCG GGTGCATACC
AGTTATAATC AAGCGGTTAC TTTGACGGGG CGGCTCTCTT CATCGGACCC AAACCTACAG
AATATCCCCA TCCGCACCGA AGAGGGACGG GCCATTCGCA CCGCCTTTAT TGCCCCCGCA
GGGTGGTCGC TGTTGGCGGC GGATTATAGC CAGATTGAGC TACGGGTATT GGCCCATATG
GGCAATGTGT CCCGTTTGAA AGAGGCCTTT CATGCTGGGT TGGATATTCA CGCCGCCACC
GCCGCCGAGC TGTTTGGGGT GCCGTTGGCG CAGGTGACGG GGGAGCATCG GCGCATGGCG
AAGACCATCA ATTTTGGTCT GGTGTATGGC ATGAGCCCGT TTGGTTTGGC CAAGCGCTTG
GGCATTCAAA ACAATGAGGC GCGGGCCTAT ATGGATCTCT ATTTTGCCCG CTATGATGGG
GTGCGTCAGC ATATGGACGC CACCATTCGC GATGCCCGCG CACACGGTTT TGTGGAGACC
TTGGGGGGGC GGCGCTGCCC CATCCGCGAC ATTAATGCCA CCCAGCGCAG CTTGCGGGAG
TTTGCCGAGC GCACCGCCAT TAATGCACCA TTACAGGGCA GCGCATCGGA TTTGATCAAA
CTGGCGATGA TCCGACTGCA TGGGGCCTTG CAAGCTGGCG GCTTTAAAGC GCGTATGGTG
TTGCAGGTGC ATGATGAACT GGTGTTGGAG GTGCCCGATA AAGAGCTGGC CGCTGTTAAA
GAGGTGGTGC GTAGCTGCAT GGAGGGGGTG ATGACGTTGA GCATTCCCTT GGTGGTGGAT
ATGGGGGTGG GCCAAAATTG GGGCGAGGCC CACTAA
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| Protein sequence | MTTQRLFLID GSGYLYRAFF GVRNLTRRDG FPTNAIFGFI KMLRKVIEDE KPDFVTIAFD
TKAPTFRHTM DAQYKANRKP MPDELRVQIP VIHDVIDAFN IPRIALEGYE ADDIIGTFAR
LGCAAGVEVV VVSGDKDLMQ LITPQVKMFD GSKDKWYGPE DVVESWGVAA ERIPDLLGLA
GDTSDNIPGV GGIGPKTAAQ LIAEFGSLEG VLHGAERIKQ PKRRTALLEQ ADTARRSLQL
ATINREVPLP FDLQGARMQR PNWARLREIY QDMSFATLAR EAEKQLQALG SEAAPSIQIE
TQPESLPNQP NYQVITSEAA FQAFMEQLKG LPRFAVDTET TDLHPHSAEL VGISIAWQPM
VAYYIPVGHA LDAAPEGQLP RADVLAALKP LLESPEIGKT GQNIKYDYQI FKRYHITMQG
IERDSMLYSY LLYGANRAHN LDAIATEELG RTTIKFEDVA GKGRKRIRFD QVPLHLAAPY
ACEDAEVTWQ AAASMAPNLD REPGLKRLYE TIERPLIPVL AEMEYAGVLV DRDVLSTMSA
DFSKRRARLV EEIHELAGEV FNVNSTQQLG HILFEKMGIK GGKRTKSGFS TDVSVLSKLA
DDGEKIPQQV LAYRSLTKLQ STYTDALVAL IHPYTGRVHT SYNQAVTLTG RLSSSDPNLQ
NIPIRTEEGR AIRTAFIAPA GWSLLAADYS QIELRVLAHM GNVSRLKEAF HAGLDIHAAT
AAELFGVPLA QVTGEHRRMA KTINFGLVYG MSPFGLAKRL GIQNNEARAY MDLYFARYDG
VRQHMDATIR DARAHGFVET LGGRRCPIRD INATQRSLRE FAERTAINAP LQGSASDLIK
LAMIRLHGAL QAGGFKARMV LQVHDELVLE VPDKELAAVK EVVRSCMEGV MTLSIPLVVD
MGVGQNWGEA H
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