Gene Mmc1_3260 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmc1_3260 
Symbolaat 
ID4481241 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMagnetococcus sp. MC-1 
KingdomBacteria 
Replicon accessionNC_008576 
Strand
Start bp4065913 
End bp4066620 
Gene Length708 bp 
Protein Length235 aa 
Translation table11 
GC content58% 
IMG OID639724010 
Productleucyl/phenylalanyl-tRNA--protein transferase 
Protein accessionYP_867156 
Protein GI117926539 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG2360] Leu/Phe-tRNA-protein transferase 
TIGRFAM ID[TIGR00667] leucyl/phenylalanyl-tRNA--protein transferase 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0971763 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTGTCT ATCGACTCGC TGCCGAACAT AATGCCTTTC CCCCCGCCGA GGGGGCGAAT 
GAAGATGGCT TGGTCGCTGT TGGTGGCGAT CTGTCACCGC AACGGCTGTT GGCGGCCTAT
CGAAGCGGTA TTTTTCCCTG GTACAGTGCC GGCGAGCCCC TCTTGTGGTG GAGTTTGGAT
CCCCGCTTGG TGCTGCGGCC CCCCGCGCTG CATGTGCCGC GCTCCTTAAA AAAAGCGATT
CGGCAAGGGG CGTTTCGTAT CACCTTTGAC CATGTGTTTG AACAGGTTAT GCACCAATGT
GGGGCCGTGC GTGCGGCAGA AGGCACCTGG ATTACCCCAG AGATGGAGCA GGCTTACCTG
CGTCTGCACC AGATGGGCTT TGCCCATAGC TGCGAAAGTT GGCTGATGGA TGAAAACCAC
CGCTATCAAC TGGCGGGGGG GATTTATGGG GTGGCCATTG GCGGGGCTTT TTTTGGGGAG
TCGATGTTCT ATCGCCAGCC CAACGCCTCC AAGGTGGCGC TGGTGGCCCT GGTGGGGCAC
TTGGCCCAGC AGGGCTATAG CCTAATGGAT TGCCAAATGA CCACCCAGCA CATGCTGCGC
TTCGGGGCGG TTGAGATGCC CCGTTCGGTG TTTTTAGAAG ATCTTCAACA GGCGATTGCA
CAGCCCATAC CGGCGGGCCT GTGGCAAACG GTAAGCCCGC TTATTTAA
 
Protein sequence
MPVYRLAAEH NAFPPAEGAN EDGLVAVGGD LSPQRLLAAY RSGIFPWYSA GEPLLWWSLD 
PRLVLRPPAL HVPRSLKKAI RQGAFRITFD HVFEQVMHQC GAVRAAEGTW ITPEMEQAYL
RLHQMGFAHS CESWLMDENH RYQLAGGIYG VAIGGAFFGE SMFYRQPNAS KVALVALVGH
LAQQGYSLMD CQMTTQHMLR FGAVEMPRSV FLEDLQQAIA QPIPAGLWQT VSPLI