Gene Mmc1_3253 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmc1_3253 
Symbol 
ID4481234 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMagnetococcus sp. MC-1 
KingdomBacteria 
Replicon accessionNC_008576 
Strand
Start bp4051124 
End bp4051960 
Gene Length837 bp 
Protein Length278 aa 
Translation table11 
GC content60% 
IMG OID639724003 
Producthypothetical protein 
Protein accessionYP_867149 
Protein GI117926532 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000000542333 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00000068187 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
ATGGTAAACC GACCTTTTCG ATCATGGTTA GTAAAACTTT GTGCGCCTCG GGTTTTACGA 
ACGCCGCTTT CGGAATTACG GTCCCTGCCG CGCTCTTTAC TTGGACCGTG GATAACCACC
GTTGGGTTGG GTATCGGGCT ATTTCTCAGC CCCATGGTTT ACGCCCAACA GCAGGCGTTT
GGCGCGGGCT ATCTTGGGCA GCAATTTGGC CAGTTTATGC GCGGCTTTAC GCGGGAGATG
GGCCAGCCGG ACACGCCCCC CCGTAGCAGC CCCGTACCGC GCCGTGAACA AGATTATGGG
GAACCCAGCC GGGGTTATGG GGAACCCAGC CGGGGTTATG GGGAACCCAG CCGGGGTTAT
GGGGAACCCC CTTATGCAGA ACCTAGATCG CGGAGACGTG AGCCCTATAG CCAGCGTGAT
GGCTACCCGC AGCGAGGGGC CGTTGAGAAC CTTGCGCCTA GGCTTCCGCA AAAAAAACGG
CCACAGTGGC GCTACGATCC CTGGGGCGTG ACCCACTACG GACCACCGCC GCCAGAGTCG
GATATCTGGT TCCCGTGGCC CCCCAATGGT GGCATCCCCG GTATGCATGG GGATTGGTAC
GCGCCGGAGC AGGGAGCGTT GCACGGCTCA AATCCGGAAT GGAGTGACCC TTATGGTCGC
TGGAGCCCCG ATAGCATTGC CCCACCCGAT GCATCAGAGC GTTGGCTAGG GCGCAGGGAT
GATACCGAGT GGATGGATAG GCAAGACCGT TGGTCAGAAC CCGGTCAGGG TTGGCCGAAC
GCTTTTCAGC CATGGCAAGA TGGGTGGGAT GGTGGTTTAT GGCATCCCTG GAGATGA
 
Protein sequence
MVNRPFRSWL VKLCAPRVLR TPLSELRSLP RSLLGPWITT VGLGIGLFLS PMVYAQQQAF 
GAGYLGQQFG QFMRGFTREM GQPDTPPRSS PVPRREQDYG EPSRGYGEPS RGYGEPSRGY
GEPPYAEPRS RRREPYSQRD GYPQRGAVEN LAPRLPQKKR PQWRYDPWGV THYGPPPPES
DIWFPWPPNG GIPGMHGDWY APEQGALHGS NPEWSDPYGR WSPDSIAPPD ASERWLGRRD
DTEWMDRQDR WSEPGQGWPN AFQPWQDGWD GGLWHPWR