| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_3242 |
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| Symbol | |
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| ID | 4483744 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Magnetococcus sp. MC-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008576 |
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| Strand | - |
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| Start bp | 4035027 |
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| End bp | 4038110 |
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| Gene Length | 3084 bp |
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| Protein Length | 1027 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 639723992 |
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| Product | PAS/PAC sensor hybrid histidine kinase |
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| Protein accession | YP_867138 |
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| Protein GI | 117926521 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase
[COG0784] FOG: CheY-like receiver |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.073449 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0177381 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAGTC TTCTTTCCAT CAACCATATT TTTGGTCTCT TTACCTTAGC GGGCATGCTG
CTGCTGTCGC TCTTTTTTGG TGGTTTGATG TTGAGTGGTT TTAATGAGGT ATTTGACCAT
CACGTTGAAC GCACGATGGA TGCCCGTCTG ACTGGTTTTG CCCAACAACT GACCGATTAT
GTGTCGCTAC ACGATGCGAT GCTTCACGAT TTGGCGAGCA ATCCACTCTT GGTGCAGGGG
GTTATGCAGC AGGAGAGCGG CAAGGCTAAT GCGGTGGATT TTCTTGAGCG ATACCGCATT
ATGGGGGCAC AACGGCGCCT GACACTCTAC GGCTTTGACG GACACTTGTT GCACGATACC
GCCAAGCAAC CTAGGCGGCC ACCCTTGTCG GAAAATTTGG TGCAAATATT GTTGCGGGGG
CATAACAAAC ATATCTGGCG GTTTCAGGCG CAGGATAAGG ATCAGAGCAG TTTGTGGATG
GCGGTACCAA TCTCCTGGAA TGCGGTGCCA GAAGGGGTGC TGGCCATGGA GATTCCTTCA
TTGGAGATGC CCCAGCTCAA ACGCCATTAT GGTCAGGGTG AGGAAGACGA TATTGAGCTG
TTTAAGGATG GAGAGCGCAT CTTTGGTGTG GATGGTCATC TTAATGGGCG TCAAGCGCAG
CTTTATATGC CCACACTGGG GATAACCCTA CGTTACACCG CGCATTTGGG GGAGATCTAT
AGCCACCGGG ATCGGCTGCT CGCGCGCATT AAAATGATCG GTTTGGCGGC ACTGCTGCTG
GCGGGTAGCG GCGTGTTTTG GATGGGCCGC GTCCTGTTTG TGCGCCCTTT GCAGCGTCTC
AAGGAGCGTA CCACCCATTT GGCCAACGGT GAAGTGCGGG ATCTGCTGAA TGAGGTGCGG
CGGCGGGTGA TGGTGCGTGA GCTACAGGAG CTAACCGATC AGTTTGATGT CATGGCCCTG
CAAGTGAGCA GTGCACGCAC CTCCCTTGAA GAGAAGGTGC ATGAGCGAAC CGCTCAGTTG
GAGTGGGAAC TGGAAGAGCG CCACAAAACG GAACACCGCT TGCGTCAAGT GTTAACCCTA
CAAACCGCCA TTTTGGATTC GGCCAATAGC AGCATCATCT CCACCGATCG CACCGGCATT
GTGCAGACCT TTAATAAAGG GGCTGAACGC ATGTTGGGTT ATAAAGCCGT CGCTGTGGTG
GGTCAGTATA CCCTGGATAT GTTTTATAAT TCCAATGAGT TACGACAGCA TTCCCTACAG
CTTAGCGCGA CGTTGGATAA GCGGGTTGAT CCGGGCATTG AGAGCCTGTT TGTGTTGGCC
CGTGAGGGTA AGGTAGACGA ACGGGAGTGG ATGATTTTAC ATCAAGATGG ACATCAGGTG
CCGGTATTGA TGACGGTAAC GCCCATTTAT AATAGCAGCG GTCTGTTGGT AGGCTATTTA
AATATGGGTA CAGAGATCTC TGAGCGCAAG CGTCTGGCGG CGGAGTTGAA AGAGACCAAC
TGGCGCTTGC AGCGGGCGTT GGACTCGGCC CAAGCAGGGA CCTTTTACTA TGCGGTTGTC
CATGACCATA TGCAGTGGAA TAGGCGCGCC TTGGAGATGT TTGGGCTAAA TGATGCCACC
TTCAACGGGC ACCTGCAAGA TTGGTTACAG CGGGTGGTGG CGGTTGATCG CCACCGCATT
GACACGCTGT TTGCCGAGGT ATTAGCTACC CCTAACGTTG AGACGCTGGA CATCTCCTAT
ACCATCTTAC GTCAGGGTGA TGAAGCGCAG CGGGTGATCC GTACTCAGGG TTGGATCCAT
CGTGATCCCC ACGGTAAAGC GACCCATCTA TCGGGGCTGT TTTTGGATAT TACGGAGCAG
ATGCAGGCTC AACAGGTGTT GGAAGAGGCT AGGCAGGCGG CAGAGGAGGC CAGTCAGGCC
AAGAGTGACT TTTTGGCCTC TATGAGTCAC GAGATCCGCA CCCCTATGAA TGCCGTCATC
GGTTTAAGTG ATGTTTTGGC AGAGACCCCA TTAAATCCAG AACAGCAGCA CTATGTGACG
ACCTTGCAAC GGGCCAGCCA TACCCTGTTG GATTTGATTA ACGCCATTTT GGATCTTTCT
AAAATTGAGT CAGGTCGGTT TGAGTTGATC GAGCGGCCCT TTGATCTGTC GGATATGGCG
CATGGGGTCT GTTCGGTCTT GCGGGTGCAA GCGGAACAGA AGGGGCTGTC TTTAGCGTTG
GAAATGGATG AGACCTTGCC ACCCTTTGTG GTGGGTGATT CACCCCGGTT ACGGCAAATT
TTAATCAACC TTATTGGTAA TGCCATTAAG TTTACCGAGC AGGGCTTTGT TAAGGTATCG
GTACAGGCCC GGGACCAACA GCGTACCCTT TGGTTTGGTA TTGCCGATAG TGGGGTGGGT
ATTGCGCCGA CCCAGGTTGA GCAGATTTTT GAAAAATTTA CCCAAGTTGA CTCCTCCGTG
GTGCGGCGCT TTGCTGGTTC TGGCCTGGGG TTGGCGATCT CTAAGCAACT GGTGGGGTTG
ATGGGTGGGC ATATTGGCGT GGAGAGCCGC TTAGGGGAGG GCAGCCTTTT CTATTTTAGC
CTGCCCTTGC GCCCCGGCGA GACTTTGTTT GAAGCGCCTT TGCGGGCACC AATTTACCAG
GAAAGCCCTG CGGAAAGTGT ACCGATACGT CTATTGGTGG TGGAGGATTC GGTCGATAAC
CGTATGTTGG TGCGTACCTA TTTTAAAAAA TATCACTGCG AACTCCGTTT TGCTGTGGAT
GGGCAGGAGG GGGTTGAAAT GTTTCAAGAG GGGGGGTGCG ATCTGGTCTT TATGGACGTA
CAGATGCCCC GTATGGATGG TTATACCGCT ACCCGGCTGA TACGCAACTG GGAGCGCAGT
CACGGCATGC AGCCCACCCC TATCTTGGCC CTTACCGCCC ACGCTTTAGA GAGCGATGTT
AAAAAGAGCC GTCAGGCGGG TTGCAACGAG CATTTGACCA AGCCCGTCTC CAAACGCACC
TTAGTTGATG CGGTGGAACG CCAACTCAAC ATCAAGCTTA TGCTACGAAG CCTACCTGCC
GTATCCCTTC CCCAGACAGT TTAG
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| Protein sequence | MKSLLSINHI FGLFTLAGML LLSLFFGGLM LSGFNEVFDH HVERTMDARL TGFAQQLTDY
VSLHDAMLHD LASNPLLVQG VMQQESGKAN AVDFLERYRI MGAQRRLTLY GFDGHLLHDT
AKQPRRPPLS ENLVQILLRG HNKHIWRFQA QDKDQSSLWM AVPISWNAVP EGVLAMEIPS
LEMPQLKRHY GQGEEDDIEL FKDGERIFGV DGHLNGRQAQ LYMPTLGITL RYTAHLGEIY
SHRDRLLARI KMIGLAALLL AGSGVFWMGR VLFVRPLQRL KERTTHLANG EVRDLLNEVR
RRVMVRELQE LTDQFDVMAL QVSSARTSLE EKVHERTAQL EWELEERHKT EHRLRQVLTL
QTAILDSANS SIISTDRTGI VQTFNKGAER MLGYKAVAVV GQYTLDMFYN SNELRQHSLQ
LSATLDKRVD PGIESLFVLA REGKVDEREW MILHQDGHQV PVLMTVTPIY NSSGLLVGYL
NMGTEISERK RLAAELKETN WRLQRALDSA QAGTFYYAVV HDHMQWNRRA LEMFGLNDAT
FNGHLQDWLQ RVVAVDRHRI DTLFAEVLAT PNVETLDISY TILRQGDEAQ RVIRTQGWIH
RDPHGKATHL SGLFLDITEQ MQAQQVLEEA RQAAEEASQA KSDFLASMSH EIRTPMNAVI
GLSDVLAETP LNPEQQHYVT TLQRASHTLL DLINAILDLS KIESGRFELI ERPFDLSDMA
HGVCSVLRVQ AEQKGLSLAL EMDETLPPFV VGDSPRLRQI LINLIGNAIK FTEQGFVKVS
VQARDQQRTL WFGIADSGVG IAPTQVEQIF EKFTQVDSSV VRRFAGSGLG LAISKQLVGL
MGGHIGVESR LGEGSLFYFS LPLRPGETLF EAPLRAPIYQ ESPAESVPIR LLVVEDSVDN
RMLVRTYFKK YHCELRFAVD GQEGVEMFQE GGCDLVFMDV QMPRMDGYTA TRLIRNWERS
HGMQPTPILA LTAHALESDV KKSRQAGCNE HLTKPVSKRT LVDAVERQLN IKLMLRSLPA
VSLPQTV
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