| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_3238 |
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| Symbol | |
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| ID | 4483740 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Magnetococcus sp. MC-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008576 |
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| Strand | - |
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| Start bp | 4029505 |
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| End bp | 4031112 |
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| Gene Length | 1608 bp |
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| Protein Length | 535 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 639723988 |
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| Product | fumarase |
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| Protein accession | YP_867134 |
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| Protein GI | 117926517 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1838] Tartrate dehydratase beta subunit/Fumarate hydratase class I, C-terminal domain
[COG1951] Tartrate dehydratase alpha subunit/Fumarate hydratase class I, N-terminal domain |
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| TIGRFAM ID | [TIGR00722] hydro-lyases, Fe-S type, tartrate/fumarate subfamily, alpha region
[TIGR00723] hydro-lyases, Fe-S type, tartrate/fumarate subfamily, beta region |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.229485 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTGAAT TTCGCCACGT AGAAGTGCTC AACCCCGGTA AAGATACCAC AACTTACCGC
CTGCTGAGCA AAGCTTATGT GCAGCTGGAA AAGGTGGGTG AGCGTAATCT GCTACGGGTT
GATCCCCAGG CGTTGACCTT GTTGGCTCAA GAGGCCATCC GAGACGTTTC GCACCTTTTT
CGCACCAGCC ATTTGCAGCA GCTCGCCCAA ATTTTAAAGG ATCCTGAGGC GTCAGACAAT
GATCGCTATG TGGCCACCGA GATGCTAAAA AATGCCAGTG TCTCAGCGGG CATGGTGTTG
CCAAGCTGTC AAGATACTGG AACGGCCACC ATCCTTGCCA AAAAAGGGGA GCAGGTTTGG
ACCGGGGGCG GTGATCGCGA AGCGCTCTCC CGTGGGGTGT TCCGTATCTA CCATGACACC
AATTTACGTT ATTCGCAGGT GGCCCCGATC ACGCTGTTTG ACGAAAAAAA TACCGGTACC
AATCTGCCCG CCCAGATTGA TATTGAGGCG GTGGATGGCG AGAGCTACAA GTTTATGTTT
GTGGTCAAGG GTGGGGGTAG CGCCAATAAG ACCTTCCTCT ATCAAGAGAC CAAGGCGCTG
CTTAACCCAG AACGTTTCCG CAGCTTTATT ACCGAAAAGG TCAAAAGTTT GGGTACCTCC
GCCTGCCCGC CCTATCATTT GGCCATTGTG GTGGGGGGGA GCTCGCCGGA GATGAACCTG
AAAACGGTTA AGTTGGCCAG TACCCGCTAT CTGGATGGAT TGCCCACTCG TGGCTCGGGT
TTGGGTGAAG GGATTCGTGA TCTGGAGTGG GAGCAGGAGG TCCATAAAAT TACCCAACAG
CTAGGCATTG GCGCCCAATT TGGCGGTAAA TATTTTGCCC ATGATGTGCG GATTATCCGC
CTGCCCCGGC ATGGGGCTTC GTGTCCGGTG GGGATTGGGG TGAGCTGTTC GGCGGATCGG
CAGATCTTGG GCAAAATTGA TAAAGAGGGC GTTTGGCTTG AGGATCTGGA TCGGGATCCC
GCCCGTTTTC TGCCCGAAAT AAGCGGTACA GAGCTAACCG AAGAGGTGGT GCATCTGGAT
CTTAACCGCT CGATGGCTGA GATCCGCGCC GAGTTAACAC GCTACCCGAT CAAGACCCGC
TTTATGCTTA CCGGCCCCAT TGTGGTGGCG CGGGACATCG CCCATGCTAA AATCAATGAA
CGTCTGGATG CCGGTGAGGG TATGCCAGAG TACCTGAAAA ATCATATTGT TTATTATGCG
GGTCCTGCTA AAACCCCCGA GGGCTACGCA TCTGGCAGCT TTGGCCCCAC CACCGCTGGC
CGCATGGATA GCTATGTAGA CCGATTCCAA AAAGAGGGGG GCTCGTTGGT TATGCTCGCC
AAGGGCAACC GCAGCCCGCA GGTGACCGAG GCCTGTCGTA GCAATGGGGG CTTTTACCTG
GGTTCTATTG GTGGCGTTGC TGCCCAGTTG GCGAAAGAGT CGATCCGCAA GGTCGAGATT
ATCGACTATC CCGAACTGGG TATGGAAGCG GTCTACCGCA TTGAAGTCGA GAACTTCCCC
GCCTTTATTA TCGTGGATGA TAAAGGCAAT GACTTTTTTA CGCCATGA
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| Protein sequence | MAEFRHVEVL NPGKDTTTYR LLSKAYVQLE KVGERNLLRV DPQALTLLAQ EAIRDVSHLF
RTSHLQQLAQ ILKDPEASDN DRYVATEMLK NASVSAGMVL PSCQDTGTAT ILAKKGEQVW
TGGGDREALS RGVFRIYHDT NLRYSQVAPI TLFDEKNTGT NLPAQIDIEA VDGESYKFMF
VVKGGGSANK TFLYQETKAL LNPERFRSFI TEKVKSLGTS ACPPYHLAIV VGGSSPEMNL
KTVKLASTRY LDGLPTRGSG LGEGIRDLEW EQEVHKITQQ LGIGAQFGGK YFAHDVRIIR
LPRHGASCPV GIGVSCSADR QILGKIDKEG VWLEDLDRDP ARFLPEISGT ELTEEVVHLD
LNRSMAEIRA ELTRYPIKTR FMLTGPIVVA RDIAHAKINE RLDAGEGMPE YLKNHIVYYA
GPAKTPEGYA SGSFGPTTAG RMDSYVDRFQ KEGGSLVMLA KGNRSPQVTE ACRSNGGFYL
GSIGGVAAQL AKESIRKVEI IDYPELGMEA VYRIEVENFP AFIIVDDKGN DFFTP
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