Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmc1_3234 |
Symbol | |
ID | 4483736 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Magnetococcus sp. MC-1 |
Kingdom | Bacteria |
Replicon accession | NC_008576 |
Strand | + |
Start bp | 4027157 |
End bp | 4027588 |
Gene Length | 432 bp |
Protein Length | 143 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 639723984 |
Product | type IV pilus assembly PilZ |
Protein accession | YP_867130 |
Protein GI | 117926513 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.288158 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCTGCCCT CCTCGGACAA CCGCCGTAAG CTGACCCGCT TACCGATGCA TCTTCAAGGA GAGTTGCAGC TTACTCAAGC GCCGCCCGTT CGTGTCCGCG TTGAGAATAT GAGCTTTTCT GGTGCTGGCG TCTATTGCGA CCATGCCCCT GCAACATGGC CAAATAAGGC GCTACGCTTG CAGCTAACCC TCAACCCTGA GGATGAACAG TTTGATATTC ATCTTCACGC AAGCCTCGTC TATGCCCACA AAGATGGCCG TTTAGGCTTG CATTTAACCG GTATTGAAGC CGACAGCTAC ACACATTTTG AAAAATTGAT GCTGCACCAT TGTGATCACG CCGATGACCT TTTACAGGAG CTCGCCCTGT GCCCCGGCCT GGAACCCGGC GAAAATGGAC GCTTTGCACC CATAACAGAA GAGGATCGGT AA
|
Protein sequence | MLPSSDNRRK LTRLPMHLQG ELQLTQAPPV RVRVENMSFS GAGVYCDHAP ATWPNKALRL QLTLNPEDEQ FDIHLHASLV YAHKDGRLGL HLTGIEADSY THFEKLMLHH CDHADDLLQE LALCPGLEPG ENGRFAPITE EDR
|
| |