Gene Mmc1_3234 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmc1_3234 
Symbol 
ID4483736 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMagnetococcus sp. MC-1 
KingdomBacteria 
Replicon accessionNC_008576 
Strand
Start bp4027157 
End bp4027588 
Gene Length432 bp 
Protein Length143 aa 
Translation table11 
GC content53% 
IMG OID639723984 
Producttype IV pilus assembly PilZ 
Protein accessionYP_867130 
Protein GI117926513 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.288158 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGCCCT CCTCGGACAA CCGCCGTAAG CTGACCCGCT TACCGATGCA TCTTCAAGGA 
GAGTTGCAGC TTACTCAAGC GCCGCCCGTT CGTGTCCGCG TTGAGAATAT GAGCTTTTCT
GGTGCTGGCG TCTATTGCGA CCATGCCCCT GCAACATGGC CAAATAAGGC GCTACGCTTG
CAGCTAACCC TCAACCCTGA GGATGAACAG TTTGATATTC ATCTTCACGC AAGCCTCGTC
TATGCCCACA AAGATGGCCG TTTAGGCTTG CATTTAACCG GTATTGAAGC CGACAGCTAC
ACACATTTTG AAAAATTGAT GCTGCACCAT TGTGATCACG CCGATGACCT TTTACAGGAG
CTCGCCCTGT GCCCCGGCCT GGAACCCGGC GAAAATGGAC GCTTTGCACC CATAACAGAA
GAGGATCGGT AA
 
Protein sequence
MLPSSDNRRK LTRLPMHLQG ELQLTQAPPV RVRVENMSFS GAGVYCDHAP ATWPNKALRL 
QLTLNPEDEQ FDIHLHASLV YAHKDGRLGL HLTGIEADSY THFEKLMLHH CDHADDLLQE
LALCPGLEPG ENGRFAPITE EDR