| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_3226 |
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| Symbol | |
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| ID | 4481891 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Magnetococcus sp. MC-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008576 |
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| Strand | - |
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| Start bp | 4013142 |
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| End bp | 4016897 |
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| Gene Length | 3756 bp |
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| Protein Length | 1251 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 639723975 |
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| Product | Hpt sensor hybrid histidine kinase |
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| Protein accession | YP_867122 |
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| Protein GI | 117926505 |
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| COG category | [E] Amino acid transport and metabolism
[K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase
[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
[COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0796968 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.806997 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTGCGCC CTCTCTACAT ATGGGTGCTA TTACTGGTCT TGAGTATTCC CGGTTTGGGG
GCGTCGTTGG CCCATGGCGA GGGATTGCTC TCTAACGACC TGCAAGCTTA CCTAAAACAG
CTAGGCAAGA TCCGCATGTG TGTGGCACCC GATTGGATGC CCTATGAGCA GGTAGATGCC
CAGGGTCGTC ATGTGGGTAT GGCTGCGGAC TACATGCGTC TGTTTGAACA GCGTTTGCAT
ACCCCGATCC AACTGGTTCC CACCGCCAGT TGGGCGCAGA GCCTGGAGGC ATCCCGCCAG
GGTCTGTGTG ATATTCTCTC CTTGGTCAAC GAAACCCCCC AGCGACAAGC ATGGCTTGAT
TTTACCACAC CTTATCTGCG TTCTCCGGCG GTGTTGGTGG TCAGGCGTGA TCGCCCAGAT
AGGGTGCAAG ATATCGCGCA GATGCGTGGG CTAAAATTGG GCATCACCAA GGGTGCTGTG
TTTGCGGAGA CGGTTAAGCC CAACCACCCT GAAATAACCC ATGTAAGCGC CAATAGTGTG
GATGAGCTGT TGGAGATGGT CTCTAACGGC CAGTTGGATG GCGCGGTCGC CTCGCTCTAT
GTGGCTTCCC ATCGGATTCG CGATCTGGGC TTGGCCAACC TCATCATTGG TAAGGTGGCG
GGGCCGCCCT TGATGCTAAG AGTGGGGGTG CGTAAAGGGG CTCCTGAGCT GTTGCAAGCT
TTTCAAGCGG TGGTGGATGG CATAAGTCAA GAGGATCATA TCCGCATACG CACCAAATGG
CACCCGGTTC TGGCGGGTGA GTTGGATGCC TGGCGTCTGT CACTTAATCC TGCCCAGCAA
GCATATCTGC AAGAAAAAAA AAGGATTAGC TATTGCGTTG ACCCCCATTG GTATCCTTTA
GAGAGCATGG ATGAGGGTGG CTTCCATGTG GGTATGTCGG CAGACTATAT GGCGCTGATG
GGCCAACGTT TGGGTGTGCC GCTGCGGTTG GTTGCCAGCC ACTCTTGGAG CGACTCGCTA
CGTATGGTGC GATTGGGCCA GTGTGATATG CTGGCTTTGG CTCAGGAGAC GGCGGCGCGT
GGCAGCTTTT TAAAGTTTAC CGATCCCTAT TTTTCTACCC CGGTGGTGTT GGTTACCCGC
AAGGATGCGC CCTTTCTGGC GGGTATAACC GATATTGGGG ATAAAGAGGT GGCTATCCCC
CTTAATTTTG CCACCTATGA TTTGGTCCGG CAAGACTATC CATGGATACC GATCCGTGAT
GTGGCAACGG TCGATGAGGG GCTGCAAAAG GTGAGTCGGG GAGATCTGTT TGCCTTGATC
AGTGCGCTAC CGGTGGCCTA CTACAGTCTT ACCCTAGGTC CGTTGGATAA TCTAAAGATC
TCTGGTCATA CCGACTATAA ACTCAAACTG GGGGTGGGGG TGCGTAAGCA GGACGCCATG
TTGCATGAGA TTATGCAGCT CGCGGTGCGT AGCATTACCC CTGAGGAGCA TATTCATATC
CGCCAGAAAT GGGGCATGGC ATCCCTGAGT CCACAGACGG ACATCGCCCT TTTGTTAAAA
GTTGGTGCCG GGCTGCTGCT TGCGTTTGTC ATGGTTTTGA TTTGGAACAG AAAATTATCC
AGGCTTACCA AGCAGTTGCA ACTGGCCAGT GCCGAGGCGC GGGTGGCCAG TGAGACCAAA
AATCTCTTTT TGGCCAATAT GAGCCACGAG GTACGCACGC CGTTGAACGC CATTATTGGC
ATGTCCCGGC TGGCGCAAGA TCTTAGAGAA GAGCATGTTC GCCAAGATTA TTTGGTCAAG
ATCCATGGGG CATCCCAATC GCTGCTGGCG ATTATTAATG ATTTGTTGGA TTTTTCCAAA
TTGGAGGCCG GTAAGCTGGC ACTGGAGCGT ACCCCCTTCC AGATCGATGA GGTGATTGCC
AATATCAACG CCATCTTGGG GCATAAAGCG GTACAAAAGG AGCTCTCGAT TCGCTACTAC
GTGGATGCCG ATGTGCCCAA TCATGTGGTG GGCGATCCGT TACGTTTGGG GCAGGTGTTG
ATTAATTTGA TGGGCAATGC CGTCAAATTT ACCGACCAGG GTTATATTGC TTTGCGGGTT
GAGCAGGTTG CCCATAGCGA GCATCGTTTA CGCCTGCGTT TTTCGGTGAA GGATAGTGGG
GTGGGTATCT CCCCCAGTGC GGTTGCGGGT CTGTTCCAAG CCTTTACCCA GGCGGATAAC
TCCATAACCC GGCGCTTTGG TGGTACCGGC CTCGGATTGG TGATTAGCCG TGAGTTGGTG
AAGGTCATGG GGGGCGATAT CCATGTCGAG AGCGAGCTTG GGGTGGGTAG CCGCTTCTTT
TTTGAAGCCG AGTTTGTGCC CATTGATGAG GGCTTGCATG CCAAAACCGA GCAGCCTTGG
CAAGGGCGCG GGGCGGTTGT GGTTGACGCG GATCGCGATG AACAAAATTA TCTAAAACAT
ATCCTTGAAC GGTGCGGCTT GGGGTGCCAC TGCTACAGCG ATCCGACGCT GTTGTTGAGT
GAGGCTTTTG CTCGTCTGGA TCCTGCACCG CATTATCTGT TTATTCGCGA GTCCAGCCTC
TCCAGCAGCG CCTTGGAGCA TCTTTCCCAC CATCTGCGGC ACCATGGGGT TGTTAAGCCC
ATGAAGCAGA TTTTGTTGTG TCGCCGCCAA GGTGGTGACG AGCGGTCGGG TTGGCATAGC
CCCCTGATGG ATAAAATGTT GGTAGAGCCT CTGCATGCGC AACAGTTGCG CCGTCTGCTT
GCGCAGTTAG AGGGGATTGA GACGCAGGAG GGGGGTGGGT TAAACGATGG GGTTTCGGCA
GCGCGTCTGC GGCGCATCCA AGGGGCTCGG GTGTTGTTAG TGGAGGATAA CGCCCTTAAC
CAACAGGTTG CGGTGGCCTT TTTAGAGCAG GCGGGCATGG AGGTGGCGGT TGCTGAAAAT
GGTTTGCGTT GTATTGAGAT GGCTGAGCAA TCGCATTATG ACTTGGTGTT CATGGACATT
CAGATGCCGG TGATGGATGG TCTGGAGGCG ACCCGCCAGT TGCGCCAACG GTCAGCCTTG
GCCAAGTTGC CAATCATTGC CATGACGGCG CAGGCCATGC CCAGTGAACG GGAATGTTCG
ATGGTGGCGG GCTTGGATGA CTATTTGACC AAACCGGTCT CTCCAGAAGC CATTCAACAG
ATGTTGGTGC GTTGGATTAG TCCCCGTCAC CCGGCCAAAG TGCGCACCCA AATGGTCGAG
CCGGCGGTCA TGCCTGTGAA GGTCGTTGAG CCGACTTTGC CGTTTAAGGC CTCCCCCGGT
TTGGGCGATA CCCCGACGCA GCGTTTGCAG GAGGATGCTC ACGAAGAGGT CGCTGCGGGG
CGTGCAGAGG ATTTGGCGCG GTTTGACACG ATTACTCAGA TGGATGTGTC GGTGGGGTTA
AGCCGCACGG GTAACAGTGC CAAGCTTTAT GAGCAGCTTT TGCGGGGCTT TTTAGAGCGC
TACTTGGATG CCCCCTTGCG GTTGGATGCC ATGCAGAGCA AGCAAGCTTG GGCAGAGATT
GGCGATTTGG CCCATGCCAT TAAAGGGGTG GCGTCGTATA TGGCGGCAGA GGCGTTGGTG
CATGCGGCGC AAGCGATGGA TCAAGCGGTT AAGCAGGAGA GTACGCACCG TTTTGAAGAG
ATTGCCGGGA TGCTCAATCA TGAGCTTAAA TTGGTCTTGG CAGATTTACA GGTATGGCGC
TCGGGCCAGC CACCACAGCA GGATGCTTCA CAGTAA
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| Protein sequence | MVRPLYIWVL LLVLSIPGLG ASLAHGEGLL SNDLQAYLKQ LGKIRMCVAP DWMPYEQVDA
QGRHVGMAAD YMRLFEQRLH TPIQLVPTAS WAQSLEASRQ GLCDILSLVN ETPQRQAWLD
FTTPYLRSPA VLVVRRDRPD RVQDIAQMRG LKLGITKGAV FAETVKPNHP EITHVSANSV
DELLEMVSNG QLDGAVASLY VASHRIRDLG LANLIIGKVA GPPLMLRVGV RKGAPELLQA
FQAVVDGISQ EDHIRIRTKW HPVLAGELDA WRLSLNPAQQ AYLQEKKRIS YCVDPHWYPL
ESMDEGGFHV GMSADYMALM GQRLGVPLRL VASHSWSDSL RMVRLGQCDM LALAQETAAR
GSFLKFTDPY FSTPVVLVTR KDAPFLAGIT DIGDKEVAIP LNFATYDLVR QDYPWIPIRD
VATVDEGLQK VSRGDLFALI SALPVAYYSL TLGPLDNLKI SGHTDYKLKL GVGVRKQDAM
LHEIMQLAVR SITPEEHIHI RQKWGMASLS PQTDIALLLK VGAGLLLAFV MVLIWNRKLS
RLTKQLQLAS AEARVASETK NLFLANMSHE VRTPLNAIIG MSRLAQDLRE EHVRQDYLVK
IHGASQSLLA IINDLLDFSK LEAGKLALER TPFQIDEVIA NINAILGHKA VQKELSIRYY
VDADVPNHVV GDPLRLGQVL INLMGNAVKF TDQGYIALRV EQVAHSEHRL RLRFSVKDSG
VGISPSAVAG LFQAFTQADN SITRRFGGTG LGLVISRELV KVMGGDIHVE SELGVGSRFF
FEAEFVPIDE GLHAKTEQPW QGRGAVVVDA DRDEQNYLKH ILERCGLGCH CYSDPTLLLS
EAFARLDPAP HYLFIRESSL SSSALEHLSH HLRHHGVVKP MKQILLCRRQ GGDERSGWHS
PLMDKMLVEP LHAQQLRRLL AQLEGIETQE GGGLNDGVSA ARLRRIQGAR VLLVEDNALN
QQVAVAFLEQ AGMEVAVAEN GLRCIEMAEQ SHYDLVFMDI QMPVMDGLEA TRQLRQRSAL
AKLPIIAMTA QAMPSERECS MVAGLDDYLT KPVSPEAIQQ MLVRWISPRH PAKVRTQMVE
PAVMPVKVVE PTLPFKASPG LGDTPTQRLQ EDAHEEVAAG RAEDLARFDT ITQMDVSVGL
SRTGNSAKLY EQLLRGFLER YLDAPLRLDA MQSKQAWAEI GDLAHAIKGV ASYMAAEALV
HAAQAMDQAV KQESTHRFEE IAGMLNHELK LVLADLQVWR SGQPPQQDAS Q
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