| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_3223 |
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| Symbol | |
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| ID | 4481888 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Magnetococcus sp. MC-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008576 |
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| Strand | - |
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| Start bp | 4007983 |
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| End bp | 4009017 |
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| Gene Length | 1035 bp |
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| Protein Length | 344 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 639723972 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_867119 |
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| Protein GI | 117926502 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.315898 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGCATTG AGATCAAGCG GCAGTGGGAT CGTGGCGCGC AACTGCATCT GCTGGCTTGC
AACCCCAAGG ATTTGGTGGA AGAGCTCAAC CGTTACCGAT TGCAGAGCGA GCAGTTGGAG
CGGGTCTATG AGTTGCACCG TCGTTTGGGG GAGAAGCCCG ATCTGGCCTC GATGATGGAA
GCCTTTTCGG CATGGTTAAA GAGCTATTTT CCCCATGAGT TGGTGGCCTA TCGGCATGGT
GGGCGGCGGC GTTCGTATAT CTCGTGTAGC TGTCATGGTC CGCAGCGGCA GAGTTTGGTG
GATGCGGCCT CCCAGCTTTT AACGGCGGAG TCGGTGGCCT CTACGTTGGG TCATCTGGAC
CTGTTGGATA TGCGTTACCG ATTTTTGCTG CTCAATCCCG AGCCGGCTGC GGAGCGGTTG
TTGCTTATTT TTGACCAGCA GAGCGATGTG GATGGTTATG AAGCGATGGT CACGTTGGTG
GCTCGGGAGT TACGTGGCCC GCTGGATCGT GTTTTGGCTT ATGAGGATCT TTATGATCAG
GCGCGTCGGG ATGCTTTGAC CGGTCTGGTT AACCGCCGGG TATTGGATGA GCGGTTGGAG
CAGGAGGTGG CCAATGCGGT GCGCTATGGG CATCCCCTCT GTTTGGCGTA TCTGGATCTG
GACCATTTTA AGGCGGTCAA CGATGTGTTG GGCCATGCTG AAGGGGATGT GGCGCTGCGG
CAGGTCTCCT TGGCGCTATC GGGTATGATC CGCGACTCGG ACTGCTTGGC ACGGGTTGGG
GGAGATGAGT TTGCCATGAT TTTACCCCAC ACTGATCTGG AGCGGGGGCG TAAATTTATG
GAGCGGCTCT GCACCACGGT GCGTTCGTTG AACATTCAAG CGCCGGGCCA CCCTGTGTTA
GGGGTGAGTA TTGGCATTAG CCAATGGCAC AGTGGGTTGG CGATGGATCA CTGGTTAGAG
GTCACGGATG CCGCCCTCTA TAAGGCCAAG GCCGGGGGGC GTTGCCGGGT CTGTACGGCG
GAGGGTGAGG AATAA
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| Protein sequence | MGIEIKRQWD RGAQLHLLAC NPKDLVEELN RYRLQSEQLE RVYELHRRLG EKPDLASMME
AFSAWLKSYF PHELVAYRHG GRRRSYISCS CHGPQRQSLV DAASQLLTAE SVASTLGHLD
LLDMRYRFLL LNPEPAAERL LLIFDQQSDV DGYEAMVTLV ARELRGPLDR VLAYEDLYDQ
ARRDALTGLV NRRVLDERLE QEVANAVRYG HPLCLAYLDL DHFKAVNDVL GHAEGDVALR
QVSLALSGMI RDSDCLARVG GDEFAMILPH TDLERGRKFM ERLCTTVRSL NIQAPGHPVL
GVSIGISQWH SGLAMDHWLE VTDAALYKAK AGGRCRVCTA EGEE
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