Gene Mmc1_3214 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmc1_3214 
Symbol 
ID4481879 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMagnetococcus sp. MC-1 
KingdomBacteria 
Replicon accessionNC_008576 
Strand
Start bp3997313 
End bp3998194 
Gene Length882 bp 
Protein Length293 aa 
Translation table11 
GC content54% 
IMG OID639723963 
Productputative signal transduction protein 
Protein accessionYP_867110 
Protein GI117926493 
COG category[T] Signal transduction mechanisms 
COG ID[COG1639] Predicted signal transduction protein 
TIGRFAM ID[TIGR00277] uncharacterized domain HDIG 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGACC TACCGAATCA ACTGCTGCGC CGCATGGATA GCCTGACCGC CTTCCCCAAA 
AGTGTGCGGC TGGTGTTGCA GTTAACATCC GACGCCAATA TTGATCCCAA AGCCTTGGTC
AATGTGATTA TTCATGATCC CATTTTGACC TTTCGTCTCT TACAAACCGT AAATGCGCCC
TTTTTTGGGC TTTCAGAAAC CATCTCCTCG GTCAATCATG CGGTGGTCTA TATCGGTTTT
AATACCATCA AAAATCTGGC TATCCACACC GCCAACCGGG GGGTGCTACC ACCCTTAACC
AGTGGTGGTG TGGACACCGC TCTCTTTCAT CGCCACGCCA TCACCGTTGC CATGCTCAGC
CGAGGTCTTG CCCTGCATAG TGGGGTCGAG GAACCTAGAA CCTCAGAATT TTTTTTGGCG
GGGCTCTTGC ATGACATTGG CAAGCTTGCC CTTTCGTCGG CCTACCCAGA ACCCTATCGC
ATCATCCAAA AGATGGTCGC CCATGAGGGA ATCTCGGTGG TAGAGGCCGA ACGGGCCCAG
TTGCAAACCG ATCACGCCGA GGTTGGCGCG GCCCTGGCTC GCCATTGGCA TTTGCCTGAA
ATGTTGGCCG ACAGTATCGG GGCCCACCAC AACCCCAATA GCTTGCTCTA TGGAGAACAA
GATGAGCACA CTTTGATGCG TGATTGTGTG TTTGTGGCCA ACCAGTTGGC CACGGTGATG
GGTCTCCGTG AGAGTGCGAC ATTACCCAAC CTTACCCCCA TGCCTGAACC CGTTAAGGCA
CGCATGGGTG GGGATTATCA AGCGTTGGCA GAAGCGATGC AACACGTCTG GCATCACCGT
GAAGCCGCTC TACAGTATGT CCAAAATGCG GCAACCTATT AG
 
Protein sequence
MADLPNQLLR RMDSLTAFPK SVRLVLQLTS DANIDPKALV NVIIHDPILT FRLLQTVNAP 
FFGLSETISS VNHAVVYIGF NTIKNLAIHT ANRGVLPPLT SGGVDTALFH RHAITVAMLS
RGLALHSGVE EPRTSEFFLA GLLHDIGKLA LSSAYPEPYR IIQKMVAHEG ISVVEAERAQ
LQTDHAEVGA ALARHWHLPE MLADSIGAHH NPNSLLYGEQ DEHTLMRDCV FVANQLATVM
GLRESATLPN LTPMPEPVKA RMGGDYQALA EAMQHVWHHR EAALQYVQNA ATY