Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmc1_3214 |
Symbol | |
ID | 4481879 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Magnetococcus sp. MC-1 |
Kingdom | Bacteria |
Replicon accession | NC_008576 |
Strand | + |
Start bp | 3997313 |
End bp | 3998194 |
Gene Length | 882 bp |
Protein Length | 293 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 639723963 |
Product | putative signal transduction protein |
Protein accession | YP_867110 |
Protein GI | 117926493 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG1639] Predicted signal transduction protein |
TIGRFAM ID | [TIGR00277] uncharacterized domain HDIG |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTGACC TACCGAATCA ACTGCTGCGC CGCATGGATA GCCTGACCGC CTTCCCCAAA AGTGTGCGGC TGGTGTTGCA GTTAACATCC GACGCCAATA TTGATCCCAA AGCCTTGGTC AATGTGATTA TTCATGATCC CATTTTGACC TTTCGTCTCT TACAAACCGT AAATGCGCCC TTTTTTGGGC TTTCAGAAAC CATCTCCTCG GTCAATCATG CGGTGGTCTA TATCGGTTTT AATACCATCA AAAATCTGGC TATCCACACC GCCAACCGGG GGGTGCTACC ACCCTTAACC AGTGGTGGTG TGGACACCGC TCTCTTTCAT CGCCACGCCA TCACCGTTGC CATGCTCAGC CGAGGTCTTG CCCTGCATAG TGGGGTCGAG GAACCTAGAA CCTCAGAATT TTTTTTGGCG GGGCTCTTGC ATGACATTGG CAAGCTTGCC CTTTCGTCGG CCTACCCAGA ACCCTATCGC ATCATCCAAA AGATGGTCGC CCATGAGGGA ATCTCGGTGG TAGAGGCCGA ACGGGCCCAG TTGCAAACCG ATCACGCCGA GGTTGGCGCG GCCCTGGCTC GCCATTGGCA TTTGCCTGAA ATGTTGGCCG ACAGTATCGG GGCCCACCAC AACCCCAATA GCTTGCTCTA TGGAGAACAA GATGAGCACA CTTTGATGCG TGATTGTGTG TTTGTGGCCA ACCAGTTGGC CACGGTGATG GGTCTCCGTG AGAGTGCGAC ATTACCCAAC CTTACCCCCA TGCCTGAACC CGTTAAGGCA CGCATGGGTG GGGATTATCA AGCGTTGGCA GAAGCGATGC AACACGTCTG GCATCACCGT GAAGCCGCTC TACAGTATGT CCAAAATGCG GCAACCTATT AG
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Protein sequence | MADLPNQLLR RMDSLTAFPK SVRLVLQLTS DANIDPKALV NVIIHDPILT FRLLQTVNAP FFGLSETISS VNHAVVYIGF NTIKNLAIHT ANRGVLPPLT SGGVDTALFH RHAITVAMLS RGLALHSGVE EPRTSEFFLA GLLHDIGKLA LSSAYPEPYR IIQKMVAHEG ISVVEAERAQ LQTDHAEVGA ALARHWHLPE MLADSIGAHH NPNSLLYGEQ DEHTLMRDCV FVANQLATVM GLRESATLPN LTPMPEPVKA RMGGDYQALA EAMQHVWHHR EAALQYVQNA ATY
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