| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_3197 |
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| Symbol | |
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| ID | 4481630 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Magnetococcus sp. MC-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008576 |
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| Strand | + |
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| Start bp | 3982067 |
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| End bp | 3983206 |
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| Gene Length | 1140 bp |
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| Protein Length | 379 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 639723946 |
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| Product | sodium ion-translocating decarboxylase, beta subunit |
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| Protein accession | YP_867093 |
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| Protein GI | 117926476 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1883] Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit |
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| TIGRFAM ID | [TIGR01109] sodium ion-translocating decarboxylase, beta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.00107579 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTATATGG ACAAATTGGC CGTGTTGTGG AACAGCACCG GTCTGGCCAA TATTCAGTTA
GATATGTTTG TGATGCTCTG TGTGGGCGCA CTGCTGCTCT ATTTGGCCAT TGTTAAGGGG
TTTGAGCCCC TGCTGCTGAT CCCCATTGGG TTTGGCTGTA TTCTCAGCAA CATCCCCCTG
GCGGGGCTGA ATGATCCCGG TGGCATGCTG CACAATGTCT ATGAAATCGG CATTGGTTCG
GGGGCCTTTC CGCTGTTGAT CTTTTTGGGC ATTGGTGCCA TGACCGATTT TGGTCCGCTC
ATTGCGCGGC CCAGCACCAT CTTGTTGGGG GCGGCGGCCC AGTTTGGCAT CTTTGTGACG
CTCATTGGCG CGTTGGCGAT GAACGCCATC CCTGGTTTTC ATTATAGCCT AGCAGACGCT
GCGGCCATTG GTATCATCGG TGGGGCGGAT GGTCCGACCG CGATCTTTCT CTCCTCCCGT
TTGGCACCGG ACCTGATGGG GGCCATTGCG GTAGCGGCCT ACTCGTACAT GGCCTTGGTG
CCCATGATTC AGCCCCCCAT CATGAGAGCG CTCACCACCG AAGATGAGCG CAAAATTGAG
ATGACCCAGC TCCGCCCGGT GGGTAAAACG GAGAAAATTT TGTTCCCCAT GCTGGTGCTG
TTGCTGTGCG CCATGTTCCT GCCCTCGGCG GCTCCGCTGA TCGGCATGTT TACCTTTGGT
AATCTGCTGC GTGAATGTGG TGTGGTGGAC CGTCTCTCCA AAACCGCACA AAATGAGCTG
ATTAACATTG TAACCATCTT CTTAGGGCTG GCGGTTGGCA CCAAACTTTC AGCGGATAAG
TTCTTGAAAG TGGAAACCTT AGGGATTTTG GTTTTGGGTA TGATCGCCTT TAGCATCGGT
ACCGCAGCGG GGGTATTGAT GGGCAAGGTG ATGTGCCGGA TGACGAAGGG GCAGGTCAAC
CCCTTGATTG GTGCTGCCGG GGTTAGTGCG GTTCCTATGG CGGCGCGGGT GGTAAATAAG
GTAGGATTAG AATCAAACCA CCACAACTTT CTGCTGATGC ACGCCATGGG TCCAAATGTG
GCGGGGGTCA TCGGCTCCGC TGTCGCGGCT GGCGTGTTGT TGGCTATCGT AGGCGGATAA
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| Protein sequence | MYMDKLAVLW NSTGLANIQL DMFVMLCVGA LLLYLAIVKG FEPLLLIPIG FGCILSNIPL
AGLNDPGGML HNVYEIGIGS GAFPLLIFLG IGAMTDFGPL IARPSTILLG AAAQFGIFVT
LIGALAMNAI PGFHYSLADA AAIGIIGGAD GPTAIFLSSR LAPDLMGAIA VAAYSYMALV
PMIQPPIMRA LTTEDERKIE MTQLRPVGKT EKILFPMLVL LLCAMFLPSA APLIGMFTFG
NLLRECGVVD RLSKTAQNEL INIVTIFLGL AVGTKLSADK FLKVETLGIL VLGMIAFSIG
TAAGVLMGKV MCRMTKGQVN PLIGAAGVSA VPMAARVVNK VGLESNHHNF LLMHAMGPNV
AGVIGSAVAA GVLLAIVGG
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