Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmc1_3186 |
Symbol | |
ID | 4482943 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Magnetococcus sp. MC-1 |
Kingdom | Bacteria |
Replicon accession | NC_008576 |
Strand | + |
Start bp | 3965476 |
End bp | 3966885 |
Gene Length | 1410 bp |
Protein Length | 469 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 639723935 |
Product | periplasmic sensor signal transduction histidine kinase |
Protein accession | YP_867082 |
Protein GI | 117926465 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGTATTT TTCTCAAACT CTTTATCGGC TTTTGGTTAA CCCTGCTGGT CATGGGCAGC CTGACGGCGT GGGCCGCATT TCATCTACGC GGGGATTTGG AGGATCGTTT TCATAACCAA ATGAATGACC TCGCCAAAGA GCGCATGTCC CTGGGCCATG CCCTGGCCTT TTATGGGGAG CAAGCCCTGC GAGACGCCCT GCGCAACCAC CCAGACAACC CCTGGATCTA CGTGGTCAAA GAGGAACGAC AAGATCTGCT GCAACGCCCC TTGCCCGGCC ATGCACAACA TTTTCTTCGC CACCGCTGGG CACCAGAGGC CAGCCTGCAC ATCTACAGCG CCCAGGTAGC CACCCAAGCC ACCCCCGAGC AGGAGCTTGC CCATCTACGC GACCACCCCA TCCCCCCACC GGTGCTGTGG TATGTGCGCG GGCCAGACAA CACCCTATAT GGCCTTATGC TAACCCCTAA GAGGCCCCCC TTTATGGGGC TAATCCTTGA GAACCGCTGG GCCTTGGCGG GTATCGTGCT CTACAGCTTG CTGGGGGTGC TGCTGCTTAC CCTGCACTTT ACCAACCCCA TTCGACGGCT CACCAAAGCG TCGCAGCAGC TCTCGTTTGG CGCGCTCAGC ACCCGCTGCG CACCGTTGCG CTTGCGTATC CCCGACGAGC TCAGCACCCT GGTGCATAGC TTTAACCATA TGGCCCAACG CTTGGAGGAA ATTTTTTCTG CGCAAAAACG TCTGATGCGG GATGTCTCCC ACGAACTCCG CTCGCCCTTG GCCCGCATGC GGGTGGCACT GGAGCTGGCT ACACGGACGC ATCCAACGGA ATCTCAAGCG CATCTCGCCA TGGTTGAACG GGAGATCCAT CGCCTAGACC GCTTGATCCA TGAGATCCTC ACCTTGGCCC ATCCCGATGC AGGGCAGCCT GTGGTATTGG AAGGCATGGT GGATCTGCAA GGCATGCTCA CCAGCATTGC CGCCGATGTC ACCCTGGAAG GCCGCCCCAG CGGACGTCAC GTTATCCTGG CCGCCAGTGA AGAGCGGCTG GTCAAAGCCA ATCCAGAAGC GCTACACTCA GCCCTGGAAA ATGTGGTGCG CAACGCGCTA CGCTACACCC CACCCCATAG CACGGTGGAT GTCACCCTGA CTGAGCAGGC CCAACAGCTG CACATCCAGG TGCGCGATCA CGGCCCTGGT GTGGCCGAAG CTGACTTGCT GCGCATTTTT AAACCCTTTT ACCGCACCAG TGCTGCACGG GAGCGGGAGA GCGGCGGCTA TGGCTTAGGG TTGGCTATTG CGCAGCGGGT GATTAGCGAA CACCATGGCA CTCTCTGGGC GGCCAATCAT AGCGAGGGCG GTTTAGTGGT CCATATCACC CTACCCATCG CGGCACCTGA ACCGGAATAA
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Protein sequence | MRIFLKLFIG FWLTLLVMGS LTAWAAFHLR GDLEDRFHNQ MNDLAKERMS LGHALAFYGE QALRDALRNH PDNPWIYVVK EERQDLLQRP LPGHAQHFLR HRWAPEASLH IYSAQVATQA TPEQELAHLR DHPIPPPVLW YVRGPDNTLY GLMLTPKRPP FMGLILENRW ALAGIVLYSL LGVLLLTLHF TNPIRRLTKA SQQLSFGALS TRCAPLRLRI PDELSTLVHS FNHMAQRLEE IFSAQKRLMR DVSHELRSPL ARMRVALELA TRTHPTESQA HLAMVEREIH RLDRLIHEIL TLAHPDAGQP VVLEGMVDLQ GMLTSIAADV TLEGRPSGRH VILAASEERL VKANPEALHS ALENVVRNAL RYTPPHSTVD VTLTEQAQQL HIQVRDHGPG VAEADLLRIF KPFYRTSAAR ERESGGYGLG LAIAQRVISE HHGTLWAANH SEGGLVVHIT LPIAAPEPE
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