Gene Mmc1_3182 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmc1_3182 
Symbol 
ID4482939 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMagnetococcus sp. MC-1 
KingdomBacteria 
Replicon accessionNC_008576 
Strand
Start bp3961261 
End bp3961755 
Gene Length495 bp 
Protein Length164 aa 
Translation table11 
GC content56% 
IMG OID639723931 
Productferric uptake regulator family protein 
Protein accessionYP_867078 
Protein GI117926461 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0735] Fe2+/Zn2+ uptake regulation proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.346814 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.115132 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGCGGA TGGCGACACA TTTCCCCCCT GGGGATCACG ATCATGGTGC GTGTGTAAAC 
ACGCTGGTAG CACGGGCCGA GTTGCAGTGT GCAAGCAATC AAGCCCGCTT AACCCCATTG
CGGCGAGAGG TGTTGACCCT GCTCGCGGCC AGCCACAAGG CGATGACTGC TTATGAAATT
TTGCAAGAGA TGGTAATGGG TGGATCGCGC AAACCAGCGC CCATCACCGT CTATCGCACC
TTGGAGTTTT TGATGGAACA GGCGTTGGTA CACCGTATCG AGTCGCGCAA TGCCTATTTT
GTCTGTTATC GGCAAGGGGG GCATGTGCAG CCCGTACAGG TTTGGATCTG CCGAAACTGC
GGTGTGGTGG CCGAGACCTG TTCGACGCAG ATGGCCTCCT TAATCCCACA ATTGGCCGAT
CAGATCGGTT TTACCCCCGC CACTACGGTG GTGGAGATTG AAGGGGTGTG TCGCGTATGT
CAGACACAAG CTTAA
 
Protein sequence
MRRMATHFPP GDHDHGACVN TLVARAELQC ASNQARLTPL RREVLTLLAA SHKAMTAYEI 
LQEMVMGGSR KPAPITVYRT LEFLMEQALV HRIESRNAYF VCYRQGGHVQ PVQVWICRNC
GVVAETCSTQ MASLIPQLAD QIGFTPATTV VEIEGVCRVC QTQA