| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_3168 |
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| Symbol | |
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| ID | 4483272 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Magnetococcus sp. MC-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008576 |
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| Strand | - |
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| Start bp | 3948357 |
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| End bp | 3951137 |
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| Gene Length | 2781 bp |
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| Protein Length | 926 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 639723917 |
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| Product | methyl-accepting chemotaxis sensory transducer |
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| Protein accession | YP_867064 |
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| Protein GI | 117926447 |
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| COG category | [N] Cell motility
[P] Inorganic ion transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG0840] Methyl-accepting chemotaxis protein
[COG2703] Hemerythrin |
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| TIGRFAM ID | [TIGR02481] hemerythrin-like metal-binding domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.0000240071 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.0523799 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACATT TAAAAATTGT GTATAAAATT GGGCTGGGTT TCATGGTGCC TGTGGTCTTG
ATGATCGGTG TCGGTGTTTG GAGTTATCTG GTCAGTGGCA GTGTTGCAGA AAAGTCCTAC
CATGCGCGGG ATACCAGCGT GCGTTTGGCG CTACAAGCGA GCCAACTTGA GCTGGATGTG
GTGCAGGTGC AACAGTGGCT GACCGATATT TCCGCAACCC GAGGTGCCGA GGGTTTTGAT
GATGGGTATG GCGAGGCAGA AAACTACTAT CAAGCAGCCT TGTTCAAGCT GGATGATTTT
GCCAAACATT ATAAGAAGCA GGGTAAAACC GACGAGGTTG CACAGATAAA AAAACTGAGC
AGTGCGTTGA CAGCTTGGTA TGCCGTGGGC AAAAAAATGG CCCAGGGTTA TATCGAAGGC
GGACCGGTGC TGGGTAACCA GCTCATGGGG GGCTTTGATG AACAAGCGGA GATTTTGCAA
GGTCAGCTCA AACCCTTTTT GGATGGACAA CGCCAGCAAA TTTATACTTT GCTGACCATG
GTTGTGGATG AAGTGAACTA TTTTGAGCAT GGGGTGGCGC TGCTTTCCTC GCTGTCGGTG
GTGTTGGTGT TGGTGCTGGG CTACCTGATC TCGCGCACCA TCACGGTGCC GGTGGCTAAA
ATGGTGGGTG CCATCAAACA GATGGCGGGG GGGGATCTGG TGGTGCGTTG CACCATGGAC
GAGCGCCGCG ATGAAGTAGG CCAAATGGCG GTAAACCTAA ACCGTTTGGC CGATGTGCTG
TGCGAAAATA TACGGATGAT TAACCTGCAA GCGGCCAACA TTAACTCCTT TGTGGGGGAG
GTGGTGCAAC TGCGGCAGGG ATTGGGGGAA AATAACCGCG ACCTGAACGA TACCACCGAG
CAGGTGGATG CCAAAAATCA GGGGTTAAGC ATGGAGATCC AAGGGATCCA AAGCCATGTG
GGGGAGACGG TGGTTAACTT GGAAACCCTG TTCCATGCTA TCCAGGAGGT CAGCAGTGGG
GTGAATACCA TCACCCATGG GGTGGACGAG GCCAACAGCA ATGTCAACAC CATGGCTGGT
GCGGCAGAGC AGATGTTGGC CAATGTGGAA GATGTGCATA CACAGATGGC CCAGGTCTAC
ACCTCGGTAG ATCACGTTTC ACGCTCGGTG CTGGAGTTGC AGAACTCACT CAAGGATGTA
CGCAAACGCT GTCAAGGGGC GGCTGCGGAG TCGGAACAGG GCAAAACCTT GGCTCAGGAT
GCCACCACAG TGATGGGGCA ACTGACCGGT TCGGCGCGGG AGATCTCCAA GGTAGTGGAG
GTCATCAATA CCATTGCGGA GCAGACCAAT ATGTTGGCTT TAAACGCCTC CATTGAGGCG
GCTGGGGCCG GTGAGGCTGG TAAGGGGTTT GCGGTGGTGG CCAACGAAGT TAAGGATCTG
GCCAGTCAAA CGGCCGGTGC CACGGAGACC ATTTGGCACC AGATCGACAC CATGCGTGGT
TTGACCGAAC GGGCCGAAAA CAGCACCAAG CGCATTCAGG AGGTGGTGGA TCGCATTGCC
ATGGCCAACA GCGATATCAA TATGGCGGTC GATGAACAAG GTCACGCCAC CAATGGGATT
GCCGAGGCCA CCAATCAGGT CTCCCGGGTG GCCGAAGAGG TGGCCCGCAA TGCCCAGGAG
CTCAGTGCGG CGGCTGGCGA TGTGGCCCGG GCAGCGGCAG AGGCCGCCAG TGGCACCCAG
CGTATCGCCT CCACCAGTGA TGAGATCGCC CAGGCGACCC ATGCCATGGA GCAGCAGGCA
CAGCAGGCAA CCTCCTCGAT TCACGCCATT CAACACGCGG CGCAGAGCAC GGCGGAAGCC
TCCCAGGTGG TGGGGCAGCA GTTGGCGGTT ACCAGAAGTG TGGTGACGGC CATGCGCGGT
TCAGTGCAAC AGTTTAATGC CCTAAGCGAT GTCGCCGCCG GGGTGAGTGA GGCGCTCTAT
GCGGCGCAAT CCCGCATGGA TGTTGGACCA GAGCTGTTTG ATGTGCAATT GATCCGCGAG
GGAATTTTGC AGGTCATGGG TCGCATCGGC CATGCCGCAA CGGTGCGGGA TGTTTCGTTG
GTTAACGATC TGTTGGACAA CCAAAACCAG CCCATGTTGG ACAAATTGCG CCAGGAGCTG
CCAAAATCGG TACAAGCCCT GCCGCTGTTT GTAAAAATGG AGCGTACCGC CGAGCAGTTG
CACAAGAGCG GTCAAGATAT TATTCACTTG GTCTCTGCGG GTGAAGAAGA GGCTCTTGAA
GATGCCATGC GCTTCTACCA CCAGCTACGT AACACTTTGT TTGAGCAGCT TAACCAACTC
TATATGGGCA GTGATAAGGA TGCCAATGCG ATCGAGCCAA AAATTCGCTG GCTCAGCAGT
TATGAGGTTG GTATTGAGAC CATTGATAGC GATCACAAAC GTTTGGTCGG CATGATGAAC
CAGCTCTATG CTGCCATGAA GACCGGTTCT AGCAGTCAAG TGATGGAAGA GCTGTTTGAT
GGCCTAATCA ACTATAGTGT GGTCCATTTT CAACGGGAAG AGCGCCTGTT TGAACAGCAT
CGCTACCCCG ATGCTGCCGG ACACAGCAAA CGGCATGAAG CCTTTAAAAC CTACGTGCTG
GGTAAGCGGG ATGAGTTTGT GGCGGGGAGC AATATTCATC TGAGTCAGGA TATTTTTACC
TACCTGGAAG AGTGGTTGAT CAACCATATT ATCCATGATG ATATGGCTTA CGTACCCTAC
CTGACCAAAA AACGTGCTTA G
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| Protein sequence | MKHLKIVYKI GLGFMVPVVL MIGVGVWSYL VSGSVAEKSY HARDTSVRLA LQASQLELDV
VQVQQWLTDI SATRGAEGFD DGYGEAENYY QAALFKLDDF AKHYKKQGKT DEVAQIKKLS
SALTAWYAVG KKMAQGYIEG GPVLGNQLMG GFDEQAEILQ GQLKPFLDGQ RQQIYTLLTM
VVDEVNYFEH GVALLSSLSV VLVLVLGYLI SRTITVPVAK MVGAIKQMAG GDLVVRCTMD
ERRDEVGQMA VNLNRLADVL CENIRMINLQ AANINSFVGE VVQLRQGLGE NNRDLNDTTE
QVDAKNQGLS MEIQGIQSHV GETVVNLETL FHAIQEVSSG VNTITHGVDE ANSNVNTMAG
AAEQMLANVE DVHTQMAQVY TSVDHVSRSV LELQNSLKDV RKRCQGAAAE SEQGKTLAQD
ATTVMGQLTG SAREISKVVE VINTIAEQTN MLALNASIEA AGAGEAGKGF AVVANEVKDL
ASQTAGATET IWHQIDTMRG LTERAENSTK RIQEVVDRIA MANSDINMAV DEQGHATNGI
AEATNQVSRV AEEVARNAQE LSAAAGDVAR AAAEAASGTQ RIASTSDEIA QATHAMEQQA
QQATSSIHAI QHAAQSTAEA SQVVGQQLAV TRSVVTAMRG SVQQFNALSD VAAGVSEALY
AAQSRMDVGP ELFDVQLIRE GILQVMGRIG HAATVRDVSL VNDLLDNQNQ PMLDKLRQEL
PKSVQALPLF VKMERTAEQL HKSGQDIIHL VSAGEEEALE DAMRFYHQLR NTLFEQLNQL
YMGSDKDANA IEPKIRWLSS YEVGIETIDS DHKRLVGMMN QLYAAMKTGS SSQVMEELFD
GLINYSVVHF QREERLFEQH RYPDAAGHSK RHEAFKTYVL GKRDEFVAGS NIHLSQDIFT
YLEEWLINHI IHDDMAYVPY LTKKRA
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