Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmc1_3168 |
Symbol | |
ID | 4483272 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Magnetococcus sp. MC-1 |
Kingdom | Bacteria |
Replicon accession | NC_008576 |
Strand | - |
Start bp | 3948357 |
End bp | 3951137 |
Gene Length | 2781 bp |
Protein Length | 926 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 639723917 |
Product | methyl-accepting chemotaxis sensory transducer |
Protein accession | YP_867064 |
Protein GI | 117926447 |
COG category | [N] Cell motility [P] Inorganic ion transport and metabolism [T] Signal transduction mechanisms |
COG ID | [COG0840] Methyl-accepting chemotaxis protein [COG2703] Hemerythrin |
TIGRFAM ID | [TIGR02481] hemerythrin-like metal-binding domain |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.0000240071 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.0523799 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACATT TAAAAATTGT GTATAAAATT GGGCTGGGTT TCATGGTGCC TGTGGTCTTG ATGATCGGTG TCGGTGTTTG GAGTTATCTG GTCAGTGGCA GTGTTGCAGA AAAGTCCTAC CATGCGCGGG ATACCAGCGT GCGTTTGGCG CTACAAGCGA GCCAACTTGA GCTGGATGTG GTGCAGGTGC AACAGTGGCT GACCGATATT TCCGCAACCC GAGGTGCCGA GGGTTTTGAT GATGGGTATG GCGAGGCAGA AAACTACTAT CAAGCAGCCT TGTTCAAGCT GGATGATTTT GCCAAACATT ATAAGAAGCA GGGTAAAACC GACGAGGTTG CACAGATAAA AAAACTGAGC AGTGCGTTGA CAGCTTGGTA TGCCGTGGGC AAAAAAATGG CCCAGGGTTA TATCGAAGGC GGACCGGTGC TGGGTAACCA GCTCATGGGG GGCTTTGATG AACAAGCGGA GATTTTGCAA GGTCAGCTCA AACCCTTTTT GGATGGACAA CGCCAGCAAA TTTATACTTT GCTGACCATG GTTGTGGATG AAGTGAACTA TTTTGAGCAT GGGGTGGCGC TGCTTTCCTC GCTGTCGGTG GTGTTGGTGT TGGTGCTGGG CTACCTGATC TCGCGCACCA TCACGGTGCC GGTGGCTAAA ATGGTGGGTG CCATCAAACA GATGGCGGGG GGGGATCTGG TGGTGCGTTG CACCATGGAC GAGCGCCGCG ATGAAGTAGG CCAAATGGCG GTAAACCTAA ACCGTTTGGC CGATGTGCTG TGCGAAAATA TACGGATGAT TAACCTGCAA GCGGCCAACA TTAACTCCTT TGTGGGGGAG GTGGTGCAAC TGCGGCAGGG ATTGGGGGAA AATAACCGCG ACCTGAACGA TACCACCGAG CAGGTGGATG CCAAAAATCA GGGGTTAAGC ATGGAGATCC AAGGGATCCA AAGCCATGTG GGGGAGACGG TGGTTAACTT GGAAACCCTG TTCCATGCTA TCCAGGAGGT CAGCAGTGGG GTGAATACCA TCACCCATGG GGTGGACGAG GCCAACAGCA ATGTCAACAC CATGGCTGGT GCGGCAGAGC AGATGTTGGC CAATGTGGAA GATGTGCATA CACAGATGGC CCAGGTCTAC ACCTCGGTAG ATCACGTTTC ACGCTCGGTG CTGGAGTTGC AGAACTCACT CAAGGATGTA CGCAAACGCT GTCAAGGGGC GGCTGCGGAG TCGGAACAGG GCAAAACCTT GGCTCAGGAT GCCACCACAG TGATGGGGCA ACTGACCGGT TCGGCGCGGG AGATCTCCAA GGTAGTGGAG GTCATCAATA CCATTGCGGA GCAGACCAAT ATGTTGGCTT TAAACGCCTC CATTGAGGCG GCTGGGGCCG GTGAGGCTGG TAAGGGGTTT GCGGTGGTGG CCAACGAAGT TAAGGATCTG GCCAGTCAAA CGGCCGGTGC CACGGAGACC ATTTGGCACC AGATCGACAC CATGCGTGGT TTGACCGAAC GGGCCGAAAA CAGCACCAAG CGCATTCAGG AGGTGGTGGA TCGCATTGCC ATGGCCAACA GCGATATCAA TATGGCGGTC GATGAACAAG GTCACGCCAC CAATGGGATT GCCGAGGCCA CCAATCAGGT CTCCCGGGTG GCCGAAGAGG TGGCCCGCAA TGCCCAGGAG CTCAGTGCGG CGGCTGGCGA TGTGGCCCGG GCAGCGGCAG AGGCCGCCAG TGGCACCCAG CGTATCGCCT CCACCAGTGA TGAGATCGCC CAGGCGACCC ATGCCATGGA GCAGCAGGCA CAGCAGGCAA CCTCCTCGAT TCACGCCATT CAACACGCGG CGCAGAGCAC GGCGGAAGCC TCCCAGGTGG TGGGGCAGCA GTTGGCGGTT ACCAGAAGTG TGGTGACGGC CATGCGCGGT TCAGTGCAAC AGTTTAATGC CCTAAGCGAT GTCGCCGCCG GGGTGAGTGA GGCGCTCTAT GCGGCGCAAT CCCGCATGGA TGTTGGACCA GAGCTGTTTG ATGTGCAATT GATCCGCGAG GGAATTTTGC AGGTCATGGG TCGCATCGGC CATGCCGCAA CGGTGCGGGA TGTTTCGTTG GTTAACGATC TGTTGGACAA CCAAAACCAG CCCATGTTGG ACAAATTGCG CCAGGAGCTG CCAAAATCGG TACAAGCCCT GCCGCTGTTT GTAAAAATGG AGCGTACCGC CGAGCAGTTG CACAAGAGCG GTCAAGATAT TATTCACTTG GTCTCTGCGG GTGAAGAAGA GGCTCTTGAA GATGCCATGC GCTTCTACCA CCAGCTACGT AACACTTTGT TTGAGCAGCT TAACCAACTC TATATGGGCA GTGATAAGGA TGCCAATGCG ATCGAGCCAA AAATTCGCTG GCTCAGCAGT TATGAGGTTG GTATTGAGAC CATTGATAGC GATCACAAAC GTTTGGTCGG CATGATGAAC CAGCTCTATG CTGCCATGAA GACCGGTTCT AGCAGTCAAG TGATGGAAGA GCTGTTTGAT GGCCTAATCA ACTATAGTGT GGTCCATTTT CAACGGGAAG AGCGCCTGTT TGAACAGCAT CGCTACCCCG ATGCTGCCGG ACACAGCAAA CGGCATGAAG CCTTTAAAAC CTACGTGCTG GGTAAGCGGG ATGAGTTTGT GGCGGGGAGC AATATTCATC TGAGTCAGGA TATTTTTACC TACCTGGAAG AGTGGTTGAT CAACCATATT ATCCATGATG ATATGGCTTA CGTACCCTAC CTGACCAAAA AACGTGCTTA G
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Protein sequence | MKHLKIVYKI GLGFMVPVVL MIGVGVWSYL VSGSVAEKSY HARDTSVRLA LQASQLELDV VQVQQWLTDI SATRGAEGFD DGYGEAENYY QAALFKLDDF AKHYKKQGKT DEVAQIKKLS SALTAWYAVG KKMAQGYIEG GPVLGNQLMG GFDEQAEILQ GQLKPFLDGQ RQQIYTLLTM VVDEVNYFEH GVALLSSLSV VLVLVLGYLI SRTITVPVAK MVGAIKQMAG GDLVVRCTMD ERRDEVGQMA VNLNRLADVL CENIRMINLQ AANINSFVGE VVQLRQGLGE NNRDLNDTTE QVDAKNQGLS MEIQGIQSHV GETVVNLETL FHAIQEVSSG VNTITHGVDE ANSNVNTMAG AAEQMLANVE DVHTQMAQVY TSVDHVSRSV LELQNSLKDV RKRCQGAAAE SEQGKTLAQD ATTVMGQLTG SAREISKVVE VINTIAEQTN MLALNASIEA AGAGEAGKGF AVVANEVKDL ASQTAGATET IWHQIDTMRG LTERAENSTK RIQEVVDRIA MANSDINMAV DEQGHATNGI AEATNQVSRV AEEVARNAQE LSAAAGDVAR AAAEAASGTQ RIASTSDEIA QATHAMEQQA QQATSSIHAI QHAAQSTAEA SQVVGQQLAV TRSVVTAMRG SVQQFNALSD VAAGVSEALY AAQSRMDVGP ELFDVQLIRE GILQVMGRIG HAATVRDVSL VNDLLDNQNQ PMLDKLRQEL PKSVQALPLF VKMERTAEQL HKSGQDIIHL VSAGEEEALE DAMRFYHQLR NTLFEQLNQL YMGSDKDANA IEPKIRWLSS YEVGIETIDS DHKRLVGMMN QLYAAMKTGS SSQVMEELFD GLINYSVVHF QREERLFEQH RYPDAAGHSK RHEAFKTYVL GKRDEFVAGS NIHLSQDIFT YLEEWLINHI IHDDMAYVPY LTKKRA
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