| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_3164 |
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| Symbol | |
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| ID | 4483268 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Magnetococcus sp. MC-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008576 |
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| Strand | + |
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| Start bp | 3940992 |
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| End bp | 3944729 |
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| Gene Length | 3738 bp |
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| Protein Length | 1245 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 639723913 |
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| Product | multi-sensor hybrid histidine kinase |
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| Protein accession | YP_867060 |
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| Protein GI | 117926443 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.26571 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.00125378 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCACAGCG AGGGCACGGT GCACCGCATG GTGGGCACCG TACAAGATAT AACCGAGCAA
AAAGAGGCCG ATCAAGCGCT GCGTTCGCTG TTGCGTGAGG TGAATTTTCA AAAATATGCG
CTGGATCAGC ACGCCATTGT CAGTGCCACT GACGCCGCTG GACGCATTAT TTATGCGAAT
GAAAAATTTG TCTCCATTAG CGGCTATGAG CGGGATGAAC TGCTGGGGCA AAACCATCGC
ATTCTTAAAT CTACTGAACA CCCACCCGCC TTTTATCAAG AGATGTGGCG CACCATTCAA
AAGGGTGAAA CCTGGCATGG CGAGGTTAAA AATAACAAAA AACAGGGGGG CTACTATTGG
GTTCGGGCCA CCATCGTGCC GTTTATGGAT GACAAGGGCA AGCCCGAACA ATATGTCTCC
ATCCGCACCG ACATTACCGA ACAGAAAGAG TCTGAACGTA AACTGATCAG CCTGCTCCAC
GAAGTCAATT TTCAGAAACA TGCTTTGGAC CAACACGCCA TTGTCAGCAT TACCGACCGT
GACGGCTTTA TCACCTATAT CAACGAACCC TTTAGCCTCA TCACCGGCTA TTCCGAGCTG
GAAATTGTTG GCGGCAAACA CCGCTTGCTG CACTCTGGCG TGCATGACCA CGCCTTTTAT
CGTGATCTCT GGGGCACCAT CTCCAGCGGC AAAGCGTGGA AAGGGGAACT GTGCAATCGG
GCCAAAAACG GCAAACTGTT TTGGGTAAGC ACCGCCATTG TGCCCTTTAT GAATGAAGCG
GGGCAGGTAG AACGCTACAT CTCGATCCAA ACCGATATTA CCCAGCGACG AGAGATCGAG
AGAGAGCTTG AAAACAACAA CTATCTCTCG GACATGGCTC TGCGCCTGTC CAATTCAGGC
TATTGGCACC TACTGCTTGA GGATGAAGGC TATTATATTT CGTCAGAACG CAAAGCACTG
ATCATGGGGG ACCCCCCTCA TCCTGGCTTC CGCTACCATA TCCAGGACGA CTGGCTGGCC
AACATTCGCA AAACCGACCC AGCCATGGCT GAACAGGTTT TCGCCAATTT TACCCAATCC
ATCGCCACCG GCCAGGATAT CCATTTTAGT TATCCCTACG TCCGCCCCGT CGATGGCCGC
ACCATCTGGT TGGAAACAGC GGGCTATGTT GAACGCGACG AGACAGGCAA ACCCTACAGA
GTTTATGGCG TCACCCAGGA TATTACCACC CGCCGGGCCG CAGAACGTGA GATCTTGCGG
GCCAAAGAGA TCGCCGAAGA GGCCACCCAA GCCAAGAGCG ATTTTTTAGC CAATATGAGC
CACGAAATTC GTACCCCCAT GAATGCCATT ATTGGCATGA GTTATCTGGC TCTACAGACA
GAATTGAGCC GCAAACAGCA AGATTATATT AACAAAATCC ACAATGCTGC CAATGCATTA
CTTGGCATTA TCAATGACAT TTTAGATTTT TCTAAGATCG AAGCGGGCAA GCTAGACATG
GAAAACCTGC CCTTTTTATT GAGCGACACC TTAGAGAGTT TAACCAACCT TATCGCGGTT
AAGGCGCGTG AAAAGGGGCT TGAGCTGCTC ATCGCCATGG ATCCCGCTGT GCCCGATGGT
TTGATAGGCG ATGATCTACG CCTTGGACAA ATTTTGGTCA ATTTGGTCAA TAACGCGGTT
AAGTTTACCG ATACTGGGGA GATTGTGGTC CGGGTCAAAC AGGTGGAGGC CAATGATCGC
GAGGTCATGC TACAATTCTC CATTTCCGAC AGTGGCATCG GCATGACCGA GGCCCAAGTT
GCCAAGCTGT TCAACTCTTT TAGCCAAGCC GATGCCTCCA CCACGCGCAA ATATGGTGGC
ACGGGCCTGG GTCTCACCAT CAGCAAAAAG CTGACGGAGA TGATGCACGG TAAAATCTGG
GTAGAGAGCA CTCCAGGGGT AGGCAGTACT TTTCTATTTA CCGCCCGCTT TGGCCTATCA
ACGCACCCGG CTAAGTCAAA GCTTAAACTG ACAGGGGATC TACAGGGTCT GCGGGTTTTA
ATCGTCGATG ACAGCGCAAC ATCCCGTGAA ATTTTTGAAC AACTGGCCAT CAGCCTCGGC
TTTGACGCCC ACTTAGCGGC CAGTGCAAGC GAAGCTTTGC TTGCCATCTA CCGAGCAGAA
GCCGCAGACA CACCCTACCA ACTGGTCTAT ACCGATTGGA AAATGCCTGG CATGGATGGT
GTCGAGCTTA CCCACCGTCT CAAAACCGCC ACAGACCTGC AACACCCCCC CAAGATAATC
ATGGTAACGG CCTATGATCG GGATGAGATG TTGCGCCGTC TAGGCTCCAA CACCGTGGAT
GGCTTTTTAA CCAAACCCGC GACATGCTCA TCCTTGATGG AAGCAGCCAT GTTGGTTTTT
GGCTTAGAAG CGCGCACCGA CTTGGAGAAT GGCGGCGAAC TACTGGGCCT AGAGGAGCTC
CAAAGCAGGG CTGGGGCACG CATTTTGTTG GTAGAGGACA ATGAGATTAA CCAACAAGTT
GCAACCGAAT TATTGGAGAT GGCCCACTTA GAAGTCGCGG TTGCCAGCAA TGGTCAGATT
GGGGTTGAGA TGGTGCGAGC CGAACCGTTT GACTTGGTTC TTATGGATAT GCAGATGCCG
GTCATGGACG GTTATACCGC AGCCCGCACC ATTCGCCAGG AGGCGCGTTT TCAAACCCTG
CCCATTCTCG CCATGACCGC CAATGCCATG GCGGGGGATC GGGAAAAATG TCTCGCTGCG
GGCATGAATG ACCATGTCGC CAAACCCATT GATCCCAAGG AGCTGTTTAC CGCATTAGCC
AAATGGATCG AGCCGCGCCA GCAACCGTTG CCCACCACCA CCAAGCTTGC CGTGGTGGAC
GACGCCCAAG AGCAGCTGCC CGAACTGCCG GGGATCGATA CCCGCAATGG CATTTTACGC
ATGGGGGGAC GGGTTGCCAG CTATAAAAAG CTGTTATCCA AGTTTATCCT TAATCAAGCC
AACAGTATCG TCGAGATTGA ACAGGCACTT GAGGCTGCTG ATATTAAGCT GGCTACCCGC
TTGGCACACA CCGTAAAGGG GATTGCCGGC ACCATAGGGG CCGATTTGCT GCAAACACGG
GCAGCAGAGA TTGAAACCAC CCTCAATAAA GGCGACACAG CGCAGGCTTT GGCTCAATGC
CCTGCCGCAC AAGCCGCGCT ACAAGAGACC ATTGCGGTAA TCCAACAGGC TCTGCCCAGC
ACAGCAGCAA CCCCGCAGCC CCAAGCGTAC GAGGCGCTGC CACTGCCCCC AGATTTTATC
CTGCAACTGG AAACGGTTAT CGCACAGGCC GAACAGTTTA GCGGAGAGGC CATTGAACGG
TTGGAAACCC TCTTACCCAC CGCGCAGGGA AACCCCTGTG CGCATTCTCT AAAAAATGCC
TACCAAGCCA TGGCCGAGTA TGATTTTGAA AAAGCCATCG CAGAGATACA AGAGGTTGTT
GCCTCTCTGC GCGGGGAGGA CAATGCAGCG GCCACTGGTG TAGACCCTGC GCAACGGGAT
GCCCTGTTTA CCCAACTCTA CGCGCAGTTG CAACAGTACA GCGCCCAAGG GGTTGATACC
CTCGAAGCCC TGGATGCTTT GCTCCCTGCG GGGGACGATA AAGAGGCGGT GCAAAAGATG
CGACAGGCCC TCAGCCAGTA TGATTTTGAG GGCGCCTTGG AATACTTAAC ACCGATTATG
GCGGTTAAAA TAATCTAA
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| Protein sequence | MHSEGTVHRM VGTVQDITEQ KEADQALRSL LREVNFQKYA LDQHAIVSAT DAAGRIIYAN
EKFVSISGYE RDELLGQNHR ILKSTEHPPA FYQEMWRTIQ KGETWHGEVK NNKKQGGYYW
VRATIVPFMD DKGKPEQYVS IRTDITEQKE SERKLISLLH EVNFQKHALD QHAIVSITDR
DGFITYINEP FSLITGYSEL EIVGGKHRLL HSGVHDHAFY RDLWGTISSG KAWKGELCNR
AKNGKLFWVS TAIVPFMNEA GQVERYISIQ TDITQRREIE RELENNNYLS DMALRLSNSG
YWHLLLEDEG YYISSERKAL IMGDPPHPGF RYHIQDDWLA NIRKTDPAMA EQVFANFTQS
IATGQDIHFS YPYVRPVDGR TIWLETAGYV ERDETGKPYR VYGVTQDITT RRAAEREILR
AKEIAEEATQ AKSDFLANMS HEIRTPMNAI IGMSYLALQT ELSRKQQDYI NKIHNAANAL
LGIINDILDF SKIEAGKLDM ENLPFLLSDT LESLTNLIAV KAREKGLELL IAMDPAVPDG
LIGDDLRLGQ ILVNLVNNAV KFTDTGEIVV RVKQVEANDR EVMLQFSISD SGIGMTEAQV
AKLFNSFSQA DASTTRKYGG TGLGLTISKK LTEMMHGKIW VESTPGVGST FLFTARFGLS
THPAKSKLKL TGDLQGLRVL IVDDSATSRE IFEQLAISLG FDAHLAASAS EALLAIYRAE
AADTPYQLVY TDWKMPGMDG VELTHRLKTA TDLQHPPKII MVTAYDRDEM LRRLGSNTVD
GFLTKPATCS SLMEAAMLVF GLEARTDLEN GGELLGLEEL QSRAGARILL VEDNEINQQV
ATELLEMAHL EVAVASNGQI GVEMVRAEPF DLVLMDMQMP VMDGYTAART IRQEARFQTL
PILAMTANAM AGDREKCLAA GMNDHVAKPI DPKELFTALA KWIEPRQQPL PTTTKLAVVD
DAQEQLPELP GIDTRNGILR MGGRVASYKK LLSKFILNQA NSIVEIEQAL EAADIKLATR
LAHTVKGIAG TIGADLLQTR AAEIETTLNK GDTAQALAQC PAAQAALQET IAVIQQALPS
TAATPQPQAY EALPLPPDFI LQLETVIAQA EQFSGEAIER LETLLPTAQG NPCAHSLKNA
YQAMAEYDFE KAIAEIQEVV ASLRGEDNAA ATGVDPAQRD ALFTQLYAQL QQYSAQGVDT
LEALDALLPA GDDKEAVQKM RQALSQYDFE GALEYLTPIM AVKII
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