Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmc1_3155 |
Symbol | |
ID | 4483293 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Magnetococcus sp. MC-1 |
Kingdom | Bacteria |
Replicon accession | NC_008576 |
Strand | + |
Start bp | 3930390 |
End bp | 3931139 |
Gene Length | 750 bp |
Protein Length | 249 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 639723903 |
Product | 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase |
Protein accession | YP_867051 |
Protein GI | 117926434 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0106] Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase |
TIGRFAM ID | [TIGR00007] phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 2 |
Fosmid unclonability p-value | 0.0000837218 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCGCATTA TTCCTGCCAT TGACCTGAAA GATGGTCAGT GTGTTCGCCT CTTTAAAGGG GACATGGACC AAAATACCGT CTACTCCGAC AACCCTGGAG AGACCGCCAA ACAGTGGGCC GAACAAGGTG CCGAACGCAT GCATGTGGTG GATCTTAACG GGGCCTTTGC CGGGGAACCG GTCAATGCCG ACGCCATCGC CGCCATCCGC AAAGCCATCA CCATCCCCAT GCAACTGGGA GGCGGCATCC GCACCCTGGA AACCCTGCAA AAACTCTTTA ACCTAGGGGT GGATTTTGCC ATCCTCGGCT CCGTGGCGGC CCGCGACCCT GAACTGGTGT TTCGCGCCTG TGAACAGTTT CCTGGCCGTA TCTCCGTGGG CATCGATGCC CGCGATGGCA AGGTCGCTGT CGAAGGCTGG GCCGAAACCA CCGACCTGAA TGCCGTCGAT CTGGCGAAAA AATTTGAAGA TGCCGGCGTG GCTGAAATTA TCTTTACCGA TATTGCCCGT GACGGCACCC TCACTGGCCC CAACGTGGCC GCTACCCGAC TCATGGCTGA ATCCGCCACC ATTCCCGTCA TCGCCTCAGG GGGGGTCTCA TGCCTTGCCG ATATTCAGGC TCTGCTGGAA AATAGCGGCC CCTACCCCAA TGGCAACCGT ATCTCCGGGG TTATTACCGG CAAAGCCATC TACGATGGCC GCCTGGACCT GGCCGCCGCC ATTGCCCTAA GCCGCCGTTG GGAGAATTAA
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Protein sequence | MRIIPAIDLK DGQCVRLFKG DMDQNTVYSD NPGETAKQWA EQGAERMHVV DLNGAFAGEP VNADAIAAIR KAITIPMQLG GGIRTLETLQ KLFNLGVDFA ILGSVAARDP ELVFRACEQF PGRISVGIDA RDGKVAVEGW AETTDLNAVD LAKKFEDAGV AEIIFTDIAR DGTLTGPNVA ATRLMAESAT IPVIASGGVS CLADIQALLE NSGPYPNGNR ISGVITGKAI YDGRLDLAAA IALSRRWEN
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