Gene Mmc1_3153 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmc1_3153 
Symbol 
ID4483291 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMagnetococcus sp. MC-1 
KingdomBacteria 
Replicon accessionNC_008576 
Strand
Start bp3927961 
End bp3928887 
Gene Length927 bp 
Protein Length308 aa 
Translation table11 
GC content59% 
IMG OID639723901 
Productcitrate (pro-3S)-lyase 
Protein accessionYP_867049 
Protein GI117926432 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2301] Citrate lyase beta subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.835356 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000457351 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGATAGGTC TCCCCATGAA ACATGCTGCG CCCGCACTGC TGCGTTCAAC ACTTTATGTG 
CCCGGTTCTA ACCCTCGGGC GCTGGCAAAA TCCACCCAGT TGGGTGCCGA TGCCGTGATT
TTTGATCTGG AGGATTCGGT TGCCCCAGAG ATGAAAGGAG AGGCCCGCCG CTTTATACGT
GAAGCACTGG GCGAGGAGCG TAACAGCACC CCTTTACGGG TGGTGCGCAT CAATGCCATG
GCAACCAGTA TGTGGCAGGC CGATCTGGAA GCGGTGCTGG GGGGGCAGCC AGACGCCATT
GCCGTACCCA AAGTGAACCA TCGGGACGAA CTGCAAGTAT TGGTGGATTT TTTGATGGGC
TGGGAGCAGC GCAATGGGGC CAGCCGCTCC ATGAGTGTAT GGCCCATGAT TGAATCCCCC
TTGGGGGTGC TCAACGCCTT GAGCATCGCT CAATCCCCTC GCGTTAACTG CTTGATCATG
GGTACCTCCG ATCTGGCCAA AGCGCTGCAT GTGCGCACCG GTCCCGAAGG GCGGGATGGC
ATGTCCTACG CCTTGCAACA CTGTGTGTTG GCCGCGCGCG CCGCTGGTGT GGCAATTTTG
GATGGGGTCT ATGTGGATAT TCAGGGTGAG GAGGGCTTCC TGGCCCAATG TCAGGATGGT
GTGCGCCTAG GCTTTGATGG CAAAACCCTC ATCCACCCCA GCCAAGTACA GCCGGCCAAC
CGCGCTTTTC TCCCCAATCA AGAAGAGCTG CAACGGGCCC GCCGTGTATT GGAAGGGTGG
CGCAAAGCCT CGGCCCGTGG CGATGAGATC TGCGTGGTGG ATGGCTATCT GGTGGAACGC
CTGCATGCCG AGGATGCCAA GCGACTCATT GCGTTATGGG ATCAGGCGCA AAACCATCTG
CGCCGGGGTA GCGAAGCGTC GCTGTAA
 
Protein sequence
MIGLPMKHAA PALLRSTLYV PGSNPRALAK STQLGADAVI FDLEDSVAPE MKGEARRFIR 
EALGEERNST PLRVVRINAM ATSMWQADLE AVLGGQPDAI AVPKVNHRDE LQVLVDFLMG
WEQRNGASRS MSVWPMIESP LGVLNALSIA QSPRVNCLIM GTSDLAKALH VRTGPEGRDG
MSYALQHCVL AARAAGVAIL DGVYVDIQGE EGFLAQCQDG VRLGFDGKTL IHPSQVQPAN
RAFLPNQEEL QRARRVLEGW RKASARGDEI CVVDGYLVER LHAEDAKRLI ALWDQAQNHL
RRGSEASL