Gene Mmc1_3144 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmc1_3144 
Symbol 
ID4483282 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMagnetococcus sp. MC-1 
KingdomBacteria 
Replicon accessionNC_008576 
Strand
Start bp3917480 
End bp3918454 
Gene Length975 bp 
Protein Length324 aa 
Translation table11 
GC content55% 
IMG OID639723892 
Productdelta-aminolevulinic acid dehydratase 
Protein accessionYP_867040 
Protein GI117926423 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0113] Delta-aminolevulinic acid dehydratase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0687619 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.212674 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGATC TGCCTTTTCG CCCACGTCGA CTGCGTACAA CACCCGCAAT CCGTGCCATG 
GTAAGGGAAA ACCATCTGCG CGCTGTGGAT TTGATCTACC CCATCTTTAT CGTGCCGGGC
CAGCAGATCC GCAAACCGGT GGTCTCCATG CCCGGTGTTA GCCAACTCTC CATCGACCAA
GCCATTGAGG TGTGCCAACA CGCTTATGAT TTGGGCGTTG GTGGTGTTAT TTTGTTTGGT
ATTCCCGACC ATAAAGATGC CGCCGGCAGC GAAAGCTTTG CCGAGCAGGG TATCTTGCAA
CAGGCCATTC ACGCCATTAA AGCGGCGGTG CCTGATCTCT ACCTGATTGC CGATGTCTGC
ATGTGTGAAT ATACCGACCA TGCCCATTGC GGTATCCTAG TGGATGGGCA GGTAGACAAT
GACCGCACCC TCAGTGTGCT GCAACGCATT GCGGTCAGTT ATGCCGATGC GGGCATTGAT
ATGGTGGCCC CCTCGGGCAT GATGGACGGT ATGGTACGTC ACATTCGCCT GGGGCTGGAC
GCCAAGGGCT ATACCCAAAT TCCGATTATG TCCTATGCCA TCAAATATGC CTCGGCCTTT
TACGGACCCT TCCGGGATGC CGCCGAAAAC ACCCCCAGCT CGGGGGATCG GCGGGGTTAC
CAGATGGACC CCGCCAACCG CCGTGAAGCC ATCAAAGAGG CCGAACAGGA TATTTTGGAA
GGGGCGGATA TTCTTATGGT CAAACCTGGC CTGCCCTACC TGGATATTGT GCGGGATCTA
CGCAACCACA CCAACCGCCC CACCGCGGTG TATAACGTGA GCGGCGAATA CGCCATGATT
AAAGCCGCCG CTATGAATGG TTGGATTGAT GAACAAGGCA CTGTGCTTGA GATGCTGTTA
GGCTTTAAAC GGGCCGGAGC GGATATGATT TTGACCTACC ATGCACTGGA TGCTGCACGC
TGGTTGCAAG GCTGA
 
Protein sequence
MADLPFRPRR LRTTPAIRAM VRENHLRAVD LIYPIFIVPG QQIRKPVVSM PGVSQLSIDQ 
AIEVCQHAYD LGVGGVILFG IPDHKDAAGS ESFAEQGILQ QAIHAIKAAV PDLYLIADVC
MCEYTDHAHC GILVDGQVDN DRTLSVLQRI AVSYADAGID MVAPSGMMDG MVRHIRLGLD
AKGYTQIPIM SYAIKYASAF YGPFRDAAEN TPSSGDRRGY QMDPANRREA IKEAEQDILE
GADILMVKPG LPYLDIVRDL RNHTNRPTAV YNVSGEYAMI KAAAMNGWID EQGTVLEMLL
GFKRAGADMI LTYHALDAAR WLQG