Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmc1_3141 |
Symbol | |
ID | 4483279 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Magnetococcus sp. MC-1 |
Kingdom | Bacteria |
Replicon accession | NC_008576 |
Strand | - |
Start bp | 3913934 |
End bp | 3914734 |
Gene Length | 801 bp |
Protein Length | 266 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 639723889 |
Product | hypothetical protein |
Protein accession | YP_867037 |
Protein GI | 117926420 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG5266] ABC-type Co2+ transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.0000239033 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.525035 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTCAAT CAAAAAAAAC AGCAAACACA CTTCTGCTTG TGCTCTGGAC GCTGCTCTAT AGCAGTGGGG CACAGGCTCA CTTTCAACTG CTCTACACCC CAGAAGTTAA TCTTAGCAAA GCGGCCACCC TGCCCATACG GCTGATCTTC GCCCATCCCC TGGAAAATGG TCATGTGATG TCCATGGCCC GCCCGCAAGC CTTTTATTAC TGGCACAAAG ATAAACGGGA GGAGCTGCTG CCCGCGCTAA CAGAGATTAC CTGGCAGGGA CCAAGCAATG GCAATACGGC CTTTGCCGCC GAGGTACCGA TTAAGCGCAA TGGCGACTAT ATCTTTGTGG TCGAGCCTAC CCCCTATTTT GAGCCCAGCG AGGAGCTTTA TATCCAGCAG CTTACCAAAA GCTTTGTCAA TAAAGGGGGG CTGCCTAGCG GATGGGAGCA GCCGTTGGGG TTAAAGGCTG AAATTGTACC CTTGAACAAG CCCACCGCTA TTTTGGTGGG GAGCACCTTT AGTGGTGTGG TGCTCAGTGA GGGGCAGCCC GTGGTCGGGG CTGAAATTGA GATTGAGTGG ATTAATGGTC AGCCGGATCT GCAAGCCAAT CGCTTTGGGG CGAGCCGAGT GACCCCCCCG GCCTCGGTCT TGGTCGCGAT TAGCGATGCC AATGGGGTGT TTACCTTTGG TATTCCCCGG GCGGGATGGT GGGGTTTTGC CGCTTTGGGG GTGGGGCCAG ATAAGCGCTA TCAAGGCAAA GCGTTAAGCC AGGACGCGGT GCTCTGGATA AGCGCCACAG AACTGCGTTA G
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Protein sequence | MSQSKKTANT LLLVLWTLLY SSGAQAHFQL LYTPEVNLSK AATLPIRLIF AHPLENGHVM SMARPQAFYY WHKDKREELL PALTEITWQG PSNGNTAFAA EVPIKRNGDY IFVVEPTPYF EPSEELYIQQ LTKSFVNKGG LPSGWEQPLG LKAEIVPLNK PTAILVGSTF SGVVLSEGQP VVGAEIEIEW INGQPDLQAN RFGASRVTPP ASVLVAISDA NGVFTFGIPR AGWWGFAALG VGPDKRYQGK ALSQDAVLWI SATELR
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