Gene Mmc1_3138 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmc1_3138 
Symbol 
ID4483133 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMagnetococcus sp. MC-1 
KingdomBacteria 
Replicon accessionNC_008576 
Strand
Start bp3911200 
End bp3911865 
Gene Length666 bp 
Protein Length221 aa 
Translation table11 
GC content60% 
IMG OID639723886 
ProductABC transporter related 
Protein accessionYP_867034 
Protein GI117926417 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1122] ABC-type cobalt transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.227859 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.759811 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGGGAGC GTGTGTTTGC CCTGCATGAT CTGCACTACA GCTACCGGAC GGGGCATCCG 
GTATTGAGCG GGGCGGATTT TGAGCTACAG CCGGGGCAGC GGGTGGCATT AACGGGGGGC
AATGGCAGCG GTAAAACCAC CCTGTTTCAT GTGATGATGG GCCTGTTACT GCCCCAGCAG
GGGCAAGTTT ACGCCTATGG CCGGTTGTGC AAGGCAGAGG TGGATTTTAT ACCGGTACGG
GCCCGTACGG GGCTGCTGTT TCAGGATGCC GATGATCAAC TTTTTTCCCC CACCGTGGCC
GAGGATATTG CCTTTGGTCC GCTCAATTTG GGTAAGAGTC CCCAGCAGGC CGCTGCCATT
GTGGAAGAGG TTTTGGCGCA GTTGCAGATG AGTGGGTATG AAACGCGCAT CACCCACCAT
CTTTCGGGGG GGGAGAAGCG CATGGTGGCC TTGGCGACGG TGTTGGCCAT GCAGCCGGAT
GTGCTGTTAT TGGATGAGCC AACCAATGCC CTGGATGAAG CGGCAGAGGC CCGTTTGGTG
GCGCTGCTGC AAGGGTTGCC TCAGGCGTTG GTGGTGATCT CCCACGACCG CCGGTTTTTG
GCGCAAGTGA CCCAGCGGCG GGTGGTGTTG CGGGATGGGT TGTTGCTGGA GGGTGGCGCG
GTATGA
 
Protein sequence
MGERVFALHD LHYSYRTGHP VLSGADFELQ PGQRVALTGG NGSGKTTLFH VMMGLLLPQQ 
GQVYAYGRLC KAEVDFIPVR ARTGLLFQDA DDQLFSPTVA EDIAFGPLNL GKSPQQAAAI
VEEVLAQLQM SGYETRITHH LSGGEKRMVA LATVLAMQPD VLLLDEPTNA LDEAAEARLV
ALLQGLPQAL VVISHDRRFL AQVTQRRVVL RDGLLLEGGA V