Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmc1_3118 |
Symbol | |
ID | 4483509 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Magnetococcus sp. MC-1 |
Kingdom | Bacteria |
Replicon accession | NC_008576 |
Strand | - |
Start bp | 3889002 |
End bp | 3889418 |
Gene Length | 417 bp |
Protein Length | 138 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 639723866 |
Product | hypothetical protein |
Protein accession | YP_867014 |
Protein GI | 117926397 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.0000000938253 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
| |
Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCCCGCAC TTAAGAAATA CCAACTGTTC ATCAGCCACT CGTGGACTTA CAGAGACACT TACGAAAAAC TCGTTGAACT CTTTGATGAG CACCCCAACT TCATTTGGGT AAATCATTCC ATACCAAAGG ATGACCCAAT TCACAATGCT GAGAACGATA AAAAGTTGTA TGAGGCAATC AAAGATAAAA TGTATCCCGT CAATTGCGTC GTGATGCTTG CGGGCGTCTA CAGCACCCAC TCTAAGTGGA TCAATAATGA AATAAAGATT GCCAAGCAGT TCTACGGAAA GCCCATCATT GCTGTTGAGC CATGGGCTTC TGAAAAGACA TCGCAGCCAG TGAAAAACAA TGCTAATGCG ATTGTGAAAT GGCAAAGTAA ATCAATTGTT GAAGCCATCC GCGACCACGC CCTTTGA
|
Protein sequence | MPALKKYQLF ISHSWTYRDT YEKLVELFDE HPNFIWVNHS IPKDDPIHNA ENDKKLYEAI KDKMYPVNCV VMLAGVYSTH SKWINNEIKI AKQFYGKPII AVEPWASEKT SQPVKNNANA IVKWQSKSIV EAIRDHAL
|
| |