| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_3099 |
|---|
| Symbol | |
|---|
| ID | 4481674 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Magnetococcus sp. MC-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008576 |
|---|
| Strand | - |
|---|
| Start bp | 3866972 |
|---|
| End bp | 3867682 |
|---|
| Gene Length | 711 bp |
|---|
| Protein Length | 236 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 639723846 |
|---|
| Product | flagellar basal body P-ring biosynthesis protein-like protein |
|---|
| Protein accession | YP_866995 |
|---|
| Protein GI | 117926378 |
|---|
| COG category | [N] Cell motility
[O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG1261] Flagellar basal body P-ring biosynthesis protein |
|---|
| TIGRFAM ID | [TIGR03170] flagella basal body P-ring formation protein FlgA |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 44 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAAA GCATCATCAC CCTGATAACC CTGATGGTGA GCCTATTATG GGTCTCTATG
GCAGGTGCTC AAGTGCTCTC TCGTTATGAG ATGGCGCAAG AAGCAGGCGT GAAACTGCAA
GATTTGCTGC GCCTTCACCA TCCCTCTTTG GAGAGCCATA GCCTCTATTT TCCCCGTAAC
CTGCAACTGC CAGAGGGTGA GGTGGATTTG CAGTTGGACA CCATGCGTCT CGAGGATCGC
CCTGGTCGTC AGACCGTGCC GGTGACGGTG CTGGTGGATG GCACCGCCCA AGCGGTGGTG
GATGCCGTGG TGGTAATCCG CAAAAATGTG ACGGTGGCGG TCCTCAAGCG CCAGCTCAAG
CGGGACGATA TTGTCGCGTT GGGGGATATC GACTGGCAAA CCATCCAGAT TAGCCGCGAG
GGATTCCGCT ATGTATCGGA CGTTCGCGAG ATTGTGGGTA AAGCCGCATC CCGGCCCGTG
CGTGCCAACA TTGCCTTGCA AGCCAGTTGG TTTGAAGAAC CGGTGGCGGT GGAGCGTGGG
GACCGGGTGC GGGTACTGCT CAAGGATGGT GCCTTGGTGA TCAATACCGT TGGGGTGGCG
GGTAAAGATG GACGGGTAGG CGAGGCCATT TTGGTGCGCA ACTTGAGTAG CAATAAGAGC
TTTCTTGCCC GTGTGATGGC ACCGGGGCAG GTGGTGGCAG AAGGTTTGTA A
|
|---|
| Protein sequence | MKKSIITLIT LMVSLLWVSM AGAQVLSRYE MAQEAGVKLQ DLLRLHHPSL ESHSLYFPRN
LQLPEGEVDL QLDTMRLEDR PGRQTVPVTV LVDGTAQAVV DAVVVIRKNV TVAVLKRQLK
RDDIVALGDI DWQTIQISRE GFRYVSDVRE IVGKAASRPV RANIALQASW FEEPVAVERG
DRVRVLLKDG ALVINTVGVA GKDGRVGEAI LVRNLSSNKS FLARVMAPGQ VVAEGL
|
|---|
| |