Gene Mmc1_3098 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmc1_3098 
Symbol 
ID4481673 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMagnetococcus sp. MC-1 
KingdomBacteria 
Replicon accessionNC_008576 
Strand
Start bp3866216 
End bp3866914 
Gene Length699 bp 
Protein Length232 aa 
Translation table11 
GC content55% 
IMG OID639723845 
Productflagellar L-ring protein 
Protein accessionYP_866994 
Protein GI117926377 
COG category[N] Cell motility 
COG ID[COG2063] Flagellar basal body L-ring protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTATGA ATGTGCAGAC AATGGTGGTA GGGGTGTTGG CCCTGGGGTT GCTTTCCGGT 
TGTGGTATGA CCCGCTCCAG TCAGCGTCCG CCAGCGCCAC AGGCGATTAT TCAGGCTCAG
CCTGCGGAGA TGTTGAACCC CAATAAGGGT TCGCTGTGGA ACAGCGGTGG GCGTAACACC
CTGTTTGCCG ATGCCAAGGC CCGTTTTGTG GGCGACCTAA TTACGGTGAA CGTGTCGGAG
AGTTCGTCGG CCAAAAAAAA TGCCATGACC GAACTTAAAC GCGAGGCTGA CAGCGAAGTG
GCGTTGGGCG GATTGTTTGG TTTGACCGAG GCGTTGCAGA AGGGGGGGCT CTCTAAATTA
GTCGACTCCA ACAGCACCAC CAGCAACCAA AACCATAAAG GGGAGGGTAC CACCTCCCGC
GATAGCACCT TTACCGCCAC CATCACCTGC CAAGTGACAG AGGTGCTCTC CAACGGCAAC
CTCCGTATTG AGGGCCGTCG GGATATTACG GTGAACCATG AAAACCAGTT TATCATCCTC
TCTGGGGTAA TTCGCCCTGA GGATATTTCC AACACCAACT CGGTTAACTC GGCACAAATT
GCCGATGCCC GCATCGACTA TTCCGGTGAG GGGGTGTTGG ATGACCAACA GCAACCCAGT
TGGCTGCAAC AGTTCTTTAC CACCTTTCAC ATCATCTAG
 
Protein sequence
MRMNVQTMVV GVLALGLLSG CGMTRSSQRP PAPQAIIQAQ PAEMLNPNKG SLWNSGGRNT 
LFADAKARFV GDLITVNVSE SSSAKKNAMT ELKREADSEV ALGGLFGLTE ALQKGGLSKL
VDSNSTTSNQ NHKGEGTTSR DSTFTATITC QVTEVLSNGN LRIEGRRDIT VNHENQFIIL
SGVIRPEDIS NTNSVNSAQI ADARIDYSGE GVLDDQQQPS WLQQFFTTFH II