Gene Mmc1_3096 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmc1_3096 
Symbol 
ID4481671 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMagnetococcus sp. MC-1 
KingdomBacteria 
Replicon accessionNC_008576 
Strand
Start bp3864358 
End bp3864834 
Gene Length477 bp 
Protein Length158 aa 
Translation table11 
GC content56% 
IMG OID639723843 
Producthypothetical protein 
Protein accessionYP_866992 
Protein GI117926375 
COG category[M] Cell wall/membrane/envelope biogenesis
[N] Cell motility
[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG3951] Rod binding protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones45 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGATT TTCTCTCCAC CAAGGCACAA GGGGTGATGA TGCAGCAGAT GGCCGGTGGT 
CAGGTGCGTC ATAGCACCGC CGGGCGCAGC AATAACCCCT CGATTGCCGG GGCGGATCGC
AGCAATCGTG TGCCCCTCTC AGAGCAGGAT GAAAAGACGT TGCGTAAGGC GGCGGCCAAC
TTTGAGGCGA TGTTTATCAA GCAGCTGTTA GGCTCCATGC GTAAGACCGT GCCGGATTTT
GGTGAGGGCG GTTTGATGCG TAAGAGCAAT GGCGAGAAAA TTTTTCGCGA TATGCTGGAT
CAAGAGTATG CCGATCTGGC CAGTAAAGGT GAGGGCGGCT TGGGCATGAA GGAGGCGATC
TATGATCAGC TGACCCGTCG TCCTGGTGGG CGTCCTGGTG GGGCGCTCAA TCCCTCGATC
GAAGCGTTGA ATGCACAATA TGCGGCCATG CAAGCACAGA AAAGCCGGGA ACATTAA
 
Protein sequence
MNDFLSTKAQ GVMMQQMAGG QVRHSTAGRS NNPSIAGADR SNRVPLSEQD EKTLRKAAAN 
FEAMFIKQLL GSMRKTVPDF GEGGLMRKSN GEKIFRDMLD QEYADLASKG EGGLGMKEAI
YDQLTRRPGG RPGGALNPSI EALNAQYAAM QAQKSREH