Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmc1_3073 |
Symbol | |
ID | 4483155 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Magnetococcus sp. MC-1 |
Kingdom | Bacteria |
Replicon accession | NC_008576 |
Strand | - |
Start bp | 3842377 |
End bp | 3843276 |
Gene Length | 900 bp |
Protein Length | 299 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 639723821 |
Product | hypothetical protein |
Protein accession | YP_866970 |
Protein GI | 117926353 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.00571967 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCCGCCCC TGCGGAACGC ATCCTGTGCC GCAGGGTGCG CGCTACCGTT AGTGAAGAGA GGCCCCCCCA TGAGCGCATT TCCCATGGGT AGAATTCTGC CCTTAAAGGC GCAGCTTAAC CAGCATCCGG TCTATGGTCG TGTACAGAGC CTGGATGAGC TGCATCTCTT TATGCAACAC CATGTCTATT CGGTATGGGA CTTTATGTCC CTGCTTAAAA CATTACAACA CCATGTTGCC CCCTCTGGTA TGCCGTGGCT ACCCCGTGCC CACACCGCCT TTGCCCGCTT TATTAATGAA ATTGTGGTGG AAGAGGAGTG TGATGAAGGG TTGCCCGGCC CCCGGGGTGA AACCACCTAC AGCAGCCACT ATCAGCTCTA TGTGGATGCC ATGCGCGAGG TTGGGGCCAA TACGGCGCAG GTGAGCCAGT TTGTGCAGCG GGTGGGGCAG GAGGGGGTGC AAACCTTCCT TAAAGTCGCC GATGTGCCAG AGCCTGCACG GGGCTTTATG CAGACCACCT TCGGTTTTAT TCGAACTGGT AAGCCCCATG TGGTGGCCGC AGCCTTTGCT CTGGGGCGGG AACATATCAT TCCCCCCATG TTTCGAGCCT TGCTGCAAGA GATGAGCATT GGTGCCGATC AAGCGCCCAT TTTCCACTAC TATCTGGAGC GGCATATTCA TTTGGATGGG GATCATCATG GCCCGCTCTC CATGCAGTTG TTGGAGTCCT TGTGTGATGG CGACCCGATC AAGATACGCG AGGCTGAGGA TGCGGCCATT CAGGCGATTC AAGCCCGCAT TATCTTTTGG TATGGGGTGG CGGAGGCGAT TACCGCGCAG CGTATGGGGC GCACCTTGAG CAAGGTGGTG GTGCCCTTGC GCAACCGCCA CAGTGGCTAA
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Protein sequence | MPPLRNASCA AGCALPLVKR GPPMSAFPMG RILPLKAQLN QHPVYGRVQS LDELHLFMQH HVYSVWDFMS LLKTLQHHVA PSGMPWLPRA HTAFARFINE IVVEEECDEG LPGPRGETTY SSHYQLYVDA MREVGANTAQ VSQFVQRVGQ EGVQTFLKVA DVPEPARGFM QTTFGFIRTG KPHVVAAAFA LGREHIIPPM FRALLQEMSI GADQAPIFHY YLERHIHLDG DHHGPLSMQL LESLCDGDPI KIREAEDAAI QAIQARIIFW YGVAEAITAQ RMGRTLSKVV VPLRNRHSG
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