Gene Mmc1_3064 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmc1_3064 
Symbol 
ID4483524 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMagnetococcus sp. MC-1 
KingdomBacteria 
Replicon accessionNC_008576 
Strand
Start bp3830855 
End bp3831328 
Gene Length474 bp 
Protein Length157 aa 
Translation table11 
GC content60% 
IMG OID639723812 
ProductBadM/Rrf2 family transcriptional regulator 
Protein accessionYP_866961 
Protein GI117926344 
COG category[K] Transcription 
COG ID[COG1959] Predicted transcriptional regulator 
TIGRFAM ID[TIGR00738] rrf2 family protein (putative transcriptional regulator)
[TIGR02010] iron-sulfur cluster assembly transcription factor IscR 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000552074 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000000647935 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
ATGCGTTTAA CCACGCGAGG ACGCTATGCC GTGACAGCGA TGCTGGATCT GGCCCAGCAT 
GCCAACCGGG GTCCCGTGAC GTTGGCAGAG ATCTCCAACC GTCAGCAAAT ATCGCTCTCC
TATCTGGAGC AGCTGTTTGC CAAATTGCGT CGTGGTGGAT TGGTGGGTAG TGTGCGCGGC
CCCGGTGGGG GTTATCAGTT GGATAGAGGG GCCGAACAGA TCTCAGTGGC GGCCATTATC
CGCGCGGTGG ATGAACCGAT TCATGCCACC TCTTGCAAGG ATAAGGGCAC GGAGGGGTGC
CGCCGTGATA CCCGCTGCAT TACCCACGAT CTGTGGGCAC GGCTGGGGGA GCATATTTAC
CACTATCTGG AGTCGGTTTC ATTGGCCCAG TTGATGCGGG ACGGTTCAGC CTTGGCCATG
CTGGGCGAGG CCGAGGTGGA CCATACCGAG ATGGTGCTGC GGGGTCCCCA TTGA
 
Protein sequence
MRLTTRGRYA VTAMLDLAQH ANRGPVTLAE ISNRQQISLS YLEQLFAKLR RGGLVGSVRG 
PGGGYQLDRG AEQISVAAII RAVDEPIHAT SCKDKGTEGC RRDTRCITHD LWARLGEHIY
HYLESVSLAQ LMRDGSALAM LGEAEVDHTE MVLRGPH