Gene Mmc1_3063 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmc1_3063 
Symbol 
ID4483523 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMagnetococcus sp. MC-1 
KingdomBacteria 
Replicon accessionNC_008576 
Strand
Start bp3829707 
End bp3830858 
Gene Length1152 bp 
Protein Length383 aa 
Translation table11 
GC content63% 
IMG OID639723811 
Productaminotransferase, class V 
Protein accessionYP_866960 
Protein GI117926343 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1104] Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes 
TIGRFAM ID[TIGR03402] cysteine desulfurase NifS 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0588987 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000000817205 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
TTGAGCATCT ATCTGGATCA CAACGCCACC ACGCCGACCC GCCCCGAAGT AGTGGAGGCG 
ATGTTGCCCT ACTTCAGCGA CAAGGCTGGT AACCCCTCAT CCGTACACAG TGCGGGGCGG
GCCGCCCGCG AGGGGTTGGA TCGAGCACGG CGCCAAGTGG CGCACCTGCT GGGGGTACAC
TTTAGCCAAG TGCTGTTTAC CAGTGGCGGT ACCGAGGCGA ACAATCTGGC CCTTTTTGGC
ATGGCGGCGC AGTTTGGTTT TGCGGGCCAT ATGGTGACCA CCACGGTGGA ACACCCCGCA
GTGGGGCGGG TGGTGGATGC CCTAGAGGCG CGGGGTATGC GGGTTACCCG CTTGCAGCCA
GACCAGCAGG GGCGAATTGG CACTGAAGCG TTGCAGGCCG CATTGCAGGA GGAGACCCGC
TTGGTCTCCA TCATGGCGGC CAATAATGAG ACCGGTGTGC TGTTGCCGGT GGTGGAGATG
GCGGCGCTGT GTCGGGCACG AGGGGTGCTG TTGCATAGCG ACGCGGTGCA GTGGGTGGGT
AAAATGCCCC TGGATTTGGC GGCAACCCCC ATCTCTTTAG TGAGCCTCTC CGCGCACAAG
TTTGGTGGCC CCAAGGGGGT TGGTGCGCTG GTGGTGGATA GCGCCATTGC CCCTCATGCG
CAACTTCTCG GTGGTGGGCA GGAGCGGGGA CGCCGCTCCG GCACCGAAAA CCTGACCGGC
ATTGTGGGGT TGGGGCGGGC GGCGGAACTG GCGATGGCGG AGATGACCGA GCAAGCCCAG
CGCTGGCGTA CATTGCGCCA GGATATGGAG CAGCAGTTGG TCACGGCGCT ACCGGAGCTG
GTGATCTATG GGGCGCAGGC CCCGCGTCTT CCCAATACCA CAATGCTGGG TTTGCCCGGT
ATGGATGGTG AGACCCTGGT GATGCAGTTG GATCTGGCAG GGGTGGCGGT GAGCAGCGGC
AGTGCGTGCA GCTCGGGCCG CACCGAGCCC TCCCATGTGC TCAAGGCGAT GGGGGTGGAT
ACAGAGACCG CCCGGGGGGC GATACGGGTC TCTCTGGGGG CGGAGAGCCA GCAAAGTGAT
ATAAACCAGC TTGTTCAAGC ATTGATCAGC AGCGTTAAGC GGCTGAAAGA TATGGCGGGC
ATGCGGGTAT AA
 
Protein sequence
MSIYLDHNAT TPTRPEVVEA MLPYFSDKAG NPSSVHSAGR AAREGLDRAR RQVAHLLGVH 
FSQVLFTSGG TEANNLALFG MAAQFGFAGH MVTTTVEHPA VGRVVDALEA RGMRVTRLQP
DQQGRIGTEA LQAALQEETR LVSIMAANNE TGVLLPVVEM AALCRARGVL LHSDAVQWVG
KMPLDLAATP ISLVSLSAHK FGGPKGVGAL VVDSAIAPHA QLLGGGQERG RRSGTENLTG
IVGLGRAAEL AMAEMTEQAQ RWRTLRQDME QQLVTALPEL VIYGAQAPRL PNTTMLGLPG
MDGETLVMQL DLAGVAVSSG SACSSGRTEP SHVLKAMGVD TETARGAIRV SLGAESQQSD
INQLVQALIS SVKRLKDMAG MRV