Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmc1_3062 |
Symbol | |
ID | 4483522 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Magnetococcus sp. MC-1 |
Kingdom | Bacteria |
Replicon accession | NC_008576 |
Strand | - |
Start bp | 3828368 |
End bp | 3829579 |
Gene Length | 1212 bp |
Protein Length | 403 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 639723810 |
Product | cysteine desulfurase IscS |
Protein accession | YP_866959 |
Protein GI | 117926342 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1104] Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes |
TIGRFAM ID | [TIGR02006] cysteine desulfurase IscS [TIGR03402] cysteine desulfurase NifS |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.635367 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 0 |
Fosmid unclonability p-value | 0.000000859331 |
Fosmid Hitchhiker | No |
Fosmid clonability | unclonable |
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Sequence |
Gene sequence | ATGAGCATGC CTATTTATAT GGATTATCAG GCCACGACCC CCATGGATCC GCGTGTGTTC GAGGCGATGA CCCCGTGGTT TGTGGAAAAA TTTGGCAATC CTGCCTCGCG CTCCCACCCC TATGGCTGGG AGGCTGATAC GGCGGTGGAA AATGCCCGTC AGCAGGTGGC AAGCAGCATT GGTGCCGATC CCCGTGAGAT TATCTTTACC TCTGGCGCGA CAGAGTCGGA CAACCTCGCC ATTGCTGGGG TCGCTAAGTT TTATAAAGAC AAAGGCAACC ATATCATCAC CCCGGTGACG GAGCACAAAG CGGTGTTGGA TACCTGCCGC TATCTGGAGC AGGAGGGGTT TGAAGTAACC TACCTGCCGG TGCAGAAAGA TGGCTTGGTG AATATGGCCG AGCTGGAGGC CGCCATTACC GACAAGACCG TGCTGGTTTC GATCATGGCG GTGAACAATG AGATTGGGGT GATCCAGCCT TTGGCCCAGA TTGGTGCCTT GTGTCGCCGT AAAAAGGTGT TTTTTCACTG TGACGCTGCC CAGGGCGTGG GTAAAATGCC CATTGATGTG AATGAGATGA ATATTGATCT TATGTCTATC TCTGGGCACA AGATCTATGG TCCTAAAGGG ATTGGCGCTC TCTATGTGCG GCGTCGTCCT CGGGTGCGGG TCAACGCCAT TATCCACGGT GGTGGACATG AGCGGGGCAT GCGCTCGGGC ACCCTCTCTA CCCCGCTGAT TGTGGGGTTG GGCGAAGCGT GCCGTCTGGC CACGGAAGAG ATGGTGGTAG AAGAGGCACG GGTGCTGCGT CTGCGTGAAA AGCTGCGCAC GGCCCTAGAG AGCCAAATGA CCCATGTGCA GACCAATGGC TCGTTGGAGC ATCGGATAGC AGGCAATTTG AACATCTCTT TTGAGTATGT CGAGGGCGAG TCCATGATGA TGGCCATTAA GGATGTGGCG GTCTCTTCGG GCAGCGCCTG TACCTCGGCC TCGTTGGAGC CCAGCTATGT GCTGCGCTCT TTAGGGCTTA ATGATGAGAT GGCACACACC TCCATCCGTT TCGGTTTAGG CCGATTTACC ACGGAAGAGG AGGTCGATGC GGTGATCAAG ATTGTCACCG GTGCGGTGGA TAAATTGCGT GAAATGTCGC CACTGTGGGA GATGGTACAA GAGGGTATTG ACCTCTCCAG CATCAAGTGG GCAGAGCACT AA
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Protein sequence | MSMPIYMDYQ ATTPMDPRVF EAMTPWFVEK FGNPASRSHP YGWEADTAVE NARQQVASSI GADPREIIFT SGATESDNLA IAGVAKFYKD KGNHIITPVT EHKAVLDTCR YLEQEGFEVT YLPVQKDGLV NMAELEAAIT DKTVLVSIMA VNNEIGVIQP LAQIGALCRR KKVFFHCDAA QGVGKMPIDV NEMNIDLMSI SGHKIYGPKG IGALYVRRRP RVRVNAIIHG GGHERGMRSG TLSTPLIVGL GEACRLATEE MVVEEARVLR LREKLRTALE SQMTHVQTNG SLEHRIAGNL NISFEYVEGE SMMMAIKDVA VSSGSACTSA SLEPSYVLRS LGLNDEMAHT SIRFGLGRFT TEEEVDAVIK IVTGAVDKLR EMSPLWEMVQ EGIDLSSIKW AEH
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