Gene Mmc1_3062 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmc1_3062 
Symbol 
ID4483522 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMagnetococcus sp. MC-1 
KingdomBacteria 
Replicon accessionNC_008576 
Strand
Start bp3828368 
End bp3829579 
Gene Length1212 bp 
Protein Length403 aa 
Translation table11 
GC content55% 
IMG OID639723810 
Productcysteine desulfurase IscS 
Protein accessionYP_866959 
Protein GI117926342 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1104] Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes 
TIGRFAM ID[TIGR02006] cysteine desulfurase IscS
[TIGR03402] cysteine desulfurase NifS 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.635367 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000000859331 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
ATGAGCATGC CTATTTATAT GGATTATCAG GCCACGACCC CCATGGATCC GCGTGTGTTC 
GAGGCGATGA CCCCGTGGTT TGTGGAAAAA TTTGGCAATC CTGCCTCGCG CTCCCACCCC
TATGGCTGGG AGGCTGATAC GGCGGTGGAA AATGCCCGTC AGCAGGTGGC AAGCAGCATT
GGTGCCGATC CCCGTGAGAT TATCTTTACC TCTGGCGCGA CAGAGTCGGA CAACCTCGCC
ATTGCTGGGG TCGCTAAGTT TTATAAAGAC AAAGGCAACC ATATCATCAC CCCGGTGACG
GAGCACAAAG CGGTGTTGGA TACCTGCCGC TATCTGGAGC AGGAGGGGTT TGAAGTAACC
TACCTGCCGG TGCAGAAAGA TGGCTTGGTG AATATGGCCG AGCTGGAGGC CGCCATTACC
GACAAGACCG TGCTGGTTTC GATCATGGCG GTGAACAATG AGATTGGGGT GATCCAGCCT
TTGGCCCAGA TTGGTGCCTT GTGTCGCCGT AAAAAGGTGT TTTTTCACTG TGACGCTGCC
CAGGGCGTGG GTAAAATGCC CATTGATGTG AATGAGATGA ATATTGATCT TATGTCTATC
TCTGGGCACA AGATCTATGG TCCTAAAGGG ATTGGCGCTC TCTATGTGCG GCGTCGTCCT
CGGGTGCGGG TCAACGCCAT TATCCACGGT GGTGGACATG AGCGGGGCAT GCGCTCGGGC
ACCCTCTCTA CCCCGCTGAT TGTGGGGTTG GGCGAAGCGT GCCGTCTGGC CACGGAAGAG
ATGGTGGTAG AAGAGGCACG GGTGCTGCGT CTGCGTGAAA AGCTGCGCAC GGCCCTAGAG
AGCCAAATGA CCCATGTGCA GACCAATGGC TCGTTGGAGC ATCGGATAGC AGGCAATTTG
AACATCTCTT TTGAGTATGT CGAGGGCGAG TCCATGATGA TGGCCATTAA GGATGTGGCG
GTCTCTTCGG GCAGCGCCTG TACCTCGGCC TCGTTGGAGC CCAGCTATGT GCTGCGCTCT
TTAGGGCTTA ATGATGAGAT GGCACACACC TCCATCCGTT TCGGTTTAGG CCGATTTACC
ACGGAAGAGG AGGTCGATGC GGTGATCAAG ATTGTCACCG GTGCGGTGGA TAAATTGCGT
GAAATGTCGC CACTGTGGGA GATGGTACAA GAGGGTATTG ACCTCTCCAG CATCAAGTGG
GCAGAGCACT AA
 
Protein sequence
MSMPIYMDYQ ATTPMDPRVF EAMTPWFVEK FGNPASRSHP YGWEADTAVE NARQQVASSI 
GADPREIIFT SGATESDNLA IAGVAKFYKD KGNHIITPVT EHKAVLDTCR YLEQEGFEVT
YLPVQKDGLV NMAELEAAIT DKTVLVSIMA VNNEIGVIQP LAQIGALCRR KKVFFHCDAA
QGVGKMPIDV NEMNIDLMSI SGHKIYGPKG IGALYVRRRP RVRVNAIIHG GGHERGMRSG
TLSTPLIVGL GEACRLATEE MVVEEARVLR LREKLRTALE SQMTHVQTNG SLEHRIAGNL
NISFEYVEGE SMMMAIKDVA VSSGSACTSA SLEPSYVLRS LGLNDEMAHT SIRFGLGRFT
TEEEVDAVIK IVTGAVDKLR EMSPLWEMVQ EGIDLSSIKW AEH