Gene Mmc1_3061 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmc1_3061 
Symbol 
ID4483521 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMagnetococcus sp. MC-1 
KingdomBacteria 
Replicon accessionNC_008576 
Strand
Start bp3827867 
End bp3828259 
Gene Length393 bp 
Protein Length130 aa 
Translation table11 
GC content51% 
IMG OID639723809 
Productscaffold protein 
Protein accessionYP_866958 
Protein GI117926341 
COG category[C] Energy production and conversion 
COG ID[COG0822] NifU homolog involved in Fe-S cluster formation 
TIGRFAM ID[TIGR01999] FeS cluster assembly scaffold IscU 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.969828 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000000668017 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
ATGGCATACA ATGAGAAAGT GCTGGACCAC TACGAAAAGC CCCGCAACGT AGGCAGCATG 
GATAAAGATG CAGATGATGT GGGAACCGGC ATGGTGGGGG CGCCCTCATG CGGTGATGTC
ATGAAGCTAC AGATCAAGGT TGACGACAAT GGCGTGATTG AAGATGCCAA GTTTAAGACC
TTTGGCTGCG GCAGTGCCAT TGCTTCCTCC TCACTGGTGA CGGAGTGGAT TAAAGGTAAG
ACCATTGATG AGGCACTGAC CATCAAAAAT AAAGATGTGG CCGAAGAGCT GGCGCTGCCA
CCGGTAAAGG TTCACTGTTC GGTGTTGGCC GAGGATGCCA TTAAGGCGGC GGTTAAAGAT
TATCGTGAAA AGCAGCAGAA GAAGGGAGCC TGA
 
Protein sequence
MAYNEKVLDH YEKPRNVGSM DKDADDVGTG MVGAPSCGDV MKLQIKVDDN GVIEDAKFKT 
FGCGSAIASS SLVTEWIKGK TIDEALTIKN KDVAEELALP PVKVHCSVLA EDAIKAAVKD
YREKQQKKGA