Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmc1_3061 |
Symbol | |
ID | 4483521 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Magnetococcus sp. MC-1 |
Kingdom | Bacteria |
Replicon accession | NC_008576 |
Strand | - |
Start bp | 3827867 |
End bp | 3828259 |
Gene Length | 393 bp |
Protein Length | 130 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 639723809 |
Product | scaffold protein |
Protein accession | YP_866958 |
Protein GI | 117926341 |
COG category | [C] Energy production and conversion |
COG ID | [COG0822] NifU homolog involved in Fe-S cluster formation |
TIGRFAM ID | [TIGR01999] FeS cluster assembly scaffold IscU |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.969828 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 0 |
Fosmid unclonability p-value | 0.000000668017 |
Fosmid Hitchhiker | No |
Fosmid clonability | unclonable |
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Sequence |
Gene sequence | ATGGCATACA ATGAGAAAGT GCTGGACCAC TACGAAAAGC CCCGCAACGT AGGCAGCATG GATAAAGATG CAGATGATGT GGGAACCGGC ATGGTGGGGG CGCCCTCATG CGGTGATGTC ATGAAGCTAC AGATCAAGGT TGACGACAAT GGCGTGATTG AAGATGCCAA GTTTAAGACC TTTGGCTGCG GCAGTGCCAT TGCTTCCTCC TCACTGGTGA CGGAGTGGAT TAAAGGTAAG ACCATTGATG AGGCACTGAC CATCAAAAAT AAAGATGTGG CCGAAGAGCT GGCGCTGCCA CCGGTAAAGG TTCACTGTTC GGTGTTGGCC GAGGATGCCA TTAAGGCGGC GGTTAAAGAT TATCGTGAAA AGCAGCAGAA GAAGGGAGCC TGA
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Protein sequence | MAYNEKVLDH YEKPRNVGSM DKDADDVGTG MVGAPSCGDV MKLQIKVDDN GVIEDAKFKT FGCGSAIASS SLVTEWIKGK TIDEALTIKN KDVAEELALP PVKVHCSVLA EDAIKAAVKD YREKQQKKGA
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