Gene Mmc1_3057 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmc1_3057 
Symbol 
ID4483517 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMagnetococcus sp. MC-1 
KingdomBacteria 
Replicon accessionNC_008576 
Strand
Start bp3824461 
End bp3824793 
Gene Length333 bp 
Protein Length110 aa 
Translation table11 
GC content50% 
IMG OID639723805 
Productferredoxin 
Protein accessionYP_866954 
Protein GI117926337 
COG category[C] Energy production and conversion 
COG ID[COG0633] Ferredoxin 
TIGRFAM ID[TIGR02007] ferredoxin, 2Fe-2S type, ISC system 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.00530572 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00000956362 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCCCAAGG TTACATTTTT ACCGATCAAT GAGACTGTGG ATGTTGAGTC GGGGCAGTCG 
TTAATGGATG TCGCGCATGA GCACCATATT CCGTTAGAGT GTGCCTGTGA GGGTTCGTTG
GCCTGTTCGA CCTGCCATGT GATAGTGGAT GAGGCGTGGT TTGATAAGTT GGAGGAGGCG
ACGGAGGATG AGGATGATAT TTTGGACAAG GCGTTTGGTT TGACGCCGCA CAGTCGTTTG
GGGTGTCAGA TCGTGATGAC GGAAGCGTTG GATGGTTTGG TGGTGACCAT TCCGGAGTAC
AGTCTTAATT TTAAGGTTGA GGTCAAGAAA TAG
 
Protein sequence
MPKVTFLPIN ETVDVESGQS LMDVAHEHHI PLECACEGSL ACSTCHVIVD EAWFDKLEEA 
TEDEDDILDK AFGLTPHSRL GCQIVMTEAL DGLVVTIPEY SLNFKVEVKK