| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_3044 |
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| Symbol | |
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| ID | 4483107 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Magnetococcus sp. MC-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008576 |
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| Strand | + |
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| Start bp | 3809298 |
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| End bp | 3810692 |
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| Gene Length | 1395 bp |
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| Protein Length | 464 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 639723791 |
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| Product | major facilitator transporter |
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| Protein accession | YP_866941 |
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| Protein GI | 117926324 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.264008 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACACTCT ACCGCAATGC CACCTATCTT AAACTCTTCG CGGCACAGGT TATTGCCCTG
ACCGGTACGG GTATCTCCAC CATTGCCATA GCCTTACTGG CTTACCAGTT GGCCGGGGCG
CAAGCGGGTA GCGTATTGGG CATTGCGCTG GCGCTCAAGA TGGTAGCCTA TGTGGTGGTC
GCCCCCCTCA TGGGTGGGAT AGCCCATCGG CTGCCCCGCC GACGCTGGAT GATCGGCATG
GATCTGCTGC GTGCCGCCCT GCTCTGTAGT CTGCCCTTTA TCCAGAGCAT TGAGCAGCTC
TATCTCTTAA TCTTTTTGAT TAATGCCTGC GCCGCTTCGT TTAAACCCCT CTACCAGGGG
GTCATTGCCG ACCTTTTGCC CGACCCACAG AACTACACCC GCGCCCTTGC CATGTTCCGC
ATCGCCTATG ATATGGAAAA TATCCTTAGC CCGGCGTTGG CGGCCCTATT GTTGATGATC
GCCAGCTATA ACCAGCTCTT TTTCTTGAAC AGCTTCACCT TTATCGTGTC GGCTCTGCTG
CTGTTGGCAA GTTCCTTCCC CGCTGCGGCA GCCAGCGACC GACTGGCTGG CGTGGGACAC
AATTTGCTAT TCGGCTTAAA AAGCTATCTG GCCACCCCCC GCTTACGGGG CCTGCTGGCC
CTTTACATGG GGGTTTCGGC GGCAAGTGCC ATGGTCATCG TCAACACGGT GGTCTATGTC
CAGGGGGAGC TGGCGGGACA TGATGTCGAG ACCGCTCAAG CGATGTTGGC GGTGGGAGCG
GGCTCTGTGC TAGCAGCCCT GCTGTTACCC AGAGCTTTAC AACGGTGGCA CAGCCGCTCC
CTCATGCTGG GGGGTGGCTG GTTGTTGGCG CTCGCTATGC TGGCCGGGGT GTTGCACCCC
AACTACACGG GGTTACTGCT GCTCTGGTTT GTATTGGGGG TTGGGCTGGC GGTGGTGCAA
ACCCCATCGG GCCAGTTAAT CACCGCCAGT TGTCAAGGGG CCGACCGCAC CGCCTTTTTT
GCGGCCAACT TTTCGCTCTC CCATAGTTGC TGGTTTTTCA GTTATCTCCT AGCGGGGCTG
TTAGGCACCC AACTGGGCCT CTCCGTTACC TTTGCCCTGT TGGCGCTGCT GATCGCCGTT
TCGGTCTATA CCGCTAGCCG CCTTTGGCCC CGCCATGAAC CCCACCAGCT TAACCACCAT
CACGATGCTA CGGCCCATCA CCACCCCCAC ATTCATGATG CCCACCACCA GCATCATCAT
CACCCAGATG ATGAACCTAG GGATGCCAAA ACCCCCCATG TTCACCACCA TCAACATCGC
CCCATGCAGC ATAGCCACAG CTTTGTGATC GACACCCACC ACCCCCACTG GCCAGAGCCA
CAAGGGGGTC GCTAA
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| Protein sequence | MTLYRNATYL KLFAAQVIAL TGTGISTIAI ALLAYQLAGA QAGSVLGIAL ALKMVAYVVV
APLMGGIAHR LPRRRWMIGM DLLRAALLCS LPFIQSIEQL YLLIFLINAC AASFKPLYQG
VIADLLPDPQ NYTRALAMFR IAYDMENILS PALAALLLMI ASYNQLFFLN SFTFIVSALL
LLASSFPAAA ASDRLAGVGH NLLFGLKSYL ATPRLRGLLA LYMGVSAASA MVIVNTVVYV
QGELAGHDVE TAQAMLAVGA GSVLAALLLP RALQRWHSRS LMLGGGWLLA LAMLAGVLHP
NYTGLLLLWF VLGVGLAVVQ TPSGQLITAS CQGADRTAFF AANFSLSHSC WFFSYLLAGL
LGTQLGLSVT FALLALLIAV SVYTASRLWP RHEPHQLNHH HDATAHHHPH IHDAHHQHHH
HPDDEPRDAK TPHVHHHQHR PMQHSHSFVI DTHHPHWPEP QGGR
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