| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_3040 |
|---|
| Symbol | |
|---|
| ID | 4483103 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Magnetococcus sp. MC-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008576 |
|---|
| Strand | - |
|---|
| Start bp | 3802883 |
|---|
| End bp | 3805009 |
|---|
| Gene Length | 2127 bp |
|---|
| Protein Length | 708 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 639723787 |
|---|
| Product | flagellar biosynthesis protein FlhA |
|---|
| Protein accession | YP_866937 |
|---|
| Protein GI | 117926320 |
|---|
| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG1298] Flagellar biosynthesis pathway, component FlhA |
|---|
| TIGRFAM ID | [TIGR01398] flagellar biosynthesis protein FlhA |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGATTCG AGGAAAACAG GAGATTCCCT TTGGCTGCCA TCGGACTACC CCTTAAACTC
CAGGGCATAT CGCTGAAAAA ATATAGCGAT CTCTATATGG CCGTGGGCGT CATTGTGGTG
ATGGCGGTGA TGATTATCCC GCTGCCATCG GAGTTGCTGG ACTTCTTCCT GTCCATCAAT
ATTGCCATTG CCATCGTGAT TTTGCTGACC ACCATCTACA TTCATAAGCC CTTGGATTTT
TCGTCGTTTC CAAGTGTGCT GTTGTTGGCA ACCATGTTTC GATTGGCCTT GAACATTGCC
ACCACCCGAC TGATTTTGCT GCATGGTGGC GAAGGGGAGT CGGCGGCGGG CGAGGTGATC
CGTGCCTTTG GTCAGTTTGT TGTCGGTGGT AACTATGTGG TGGGTGTGAT CATCTTCTCG
ATTTTGGTGA TCATCAACTT TATCGTCATC ACCAAGGGTG CGGGACGTAT CGCCGAGGTG
GCCGCGCGTT TTACCTTGGA TAAAATGCCC GGTAAACAGA TGGCCATTGA CGCCGACCTT
AACTCGGGTC TAATCACCGA GGACGAGGCC CGTAGACGAC GCAGTGAAAT TGAGCAAGAG
TCTGAATTTT TTGGAGCCAT GGACGGTGCT TCTAAATTTG TGCGGGGGGA TGCCATTGCG
GGTATCTTGA TTACCCTGAT CAACATTGTG GCGGGCTTTA TTATCGGTGT GGCCCAGTTG
GATCTGAGCG CGGCACAGTC GGCGCAGATC TATACAATTT TGACGGTTGG CGACGGATTG
GTGGCGCAGA TCCCCACCTT GGTGATCTCC GCAGGGGCTG GTTTTTTGGT GACCCGTGCT
TCGGGTGACG CCAACATGGC GGACCATGTT AGCCAGCAGA TGACCGCACA GCCTCGGGTG
ATTTTGATGA GCGCCGTGGT GCTGGGTCTG TTGGCGATTA TCCCTGGCAT GCCCACGGTG
GCCTTTGGTC TGTTGGCAAT TGCCATGGGT AGTTGGTCTT GGTACCTGTT CCGCCGGGCC
GAGCAGCGCG ATGAAGCGGT ACAGCACAAA GCCATGGCCG AAGCCGAGGC CGAAGCCGAG
GCCGAGGAGC CCATTGAAAG CTATCTGGCC CTGGATCTGC TACGCTTGGA TGTTGGCTAT
GGCCTGATTT CGCTGGTGGA TGAGACGCAA CATGGGGATC TGTTGGATAA GATTCGCTCC
ATCCGTCGCC AGTTTGCCCA GGATATGGGC TTTGTGGTGC CCCCCATTCA CATTAAGGAC
AACCTGCAAC TCAAGCCCGG CGAATACAGC TATCTGGTGA AGGGGGTTGA GGTGGGGCAG
GGTGAGCTGC GTCCCGGTAG TTATCTGGCC ATGGAGGGGG GCGATGTGAC GGGGCAGATT
CATGGCATTG CAACGGTGGA GCCCGCCTTT GGTCTGCCTG CCCAGTGGAT TGCCTCAGGG
GAGCGCGAGC GGGCAGAGAT GTTGGGTTAT ACTGTGGTGG ATGCCTCCAC GGTGCTGGCG
ACCCATATCA CCGAGATGGT GCATAACCAC GCCCATGAGA TGCTGACCCG CCAAGAGGTG
CAAAACCTGC TGGATCTGGT CTCTAAAAAC CAGCCTAAGC TGGTGGAGGA GTTGATCCCC
AATATCGTCT CGTTGGGCGA TGTGCAAAAG GTGCTGCAAG GTTTGCTGCG GGAGCGGGTT
TCCATCCGCG ATATGGGGAC CATTTTAGAA ACCCTCGCCG ACTATGGCAA GATTATCAAA
CAGCCCCAGC AGTTGGTAGA GTTGGTTAGG CAATCACTGT CGCGCTCCAT TGTGCGCCGC
TATCTGGATG ATGAGGGCAC CCTAACGGCG CTGGTGTTGG GGCCGGATGC GGAAAACTTG
GTGGCAGAGG CCATTGTCAG TGGTGACTAT GGTTCTTACC TGTCATTGTC GCCGCGCTCG
GCCCAGCAGC TCCTTACCCG GGTGCGGAGC GAGGTAGAGA AGGCGGCCAC CGTGGTGGTG
CAGCCGGTGT TGATTACCGG TTCGCGGGTG CGACCCTTTG TTAAGCAGGC GTTGGAGGGG
GTGCTACCCC ATTTGGTGGT GTTGTCACAA AATGAGATAC CCGCCAATGT GTCGGTTAGC
AGCTTGGGTA GCATCCATTT GTCGTAA
|
|---|
| Protein sequence | MRFEENRRFP LAAIGLPLKL QGISLKKYSD LYMAVGVIVV MAVMIIPLPS ELLDFFLSIN
IAIAIVILLT TIYIHKPLDF SSFPSVLLLA TMFRLALNIA TTRLILLHGG EGESAAGEVI
RAFGQFVVGG NYVVGVIIFS ILVIINFIVI TKGAGRIAEV AARFTLDKMP GKQMAIDADL
NSGLITEDEA RRRRSEIEQE SEFFGAMDGA SKFVRGDAIA GILITLINIV AGFIIGVAQL
DLSAAQSAQI YTILTVGDGL VAQIPTLVIS AGAGFLVTRA SGDANMADHV SQQMTAQPRV
ILMSAVVLGL LAIIPGMPTV AFGLLAIAMG SWSWYLFRRA EQRDEAVQHK AMAEAEAEAE
AEEPIESYLA LDLLRLDVGY GLISLVDETQ HGDLLDKIRS IRRQFAQDMG FVVPPIHIKD
NLQLKPGEYS YLVKGVEVGQ GELRPGSYLA MEGGDVTGQI HGIATVEPAF GLPAQWIASG
ERERAEMLGY TVVDASTVLA THITEMVHNH AHEMLTRQEV QNLLDLVSKN QPKLVEELIP
NIVSLGDVQK VLQGLLRERV SIRDMGTILE TLADYGKIIK QPQQLVELVR QSLSRSIVRR
YLDDEGTLTA LVLGPDAENL VAEAIVSGDY GSYLSLSPRS AQQLLTRVRS EVEKAATVVV
QPVLITGSRV RPFVKQALEG VLPHLVVLSQ NEIPANVSVS SLGSIHLS
|
|---|
| |