| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_3018 |
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| Symbol | |
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| ID | 4483623 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Magnetococcus sp. MC-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008576 |
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| Strand | - |
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| Start bp | 3773952 |
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| End bp | 3777176 |
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| Gene Length | 3225 bp |
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| Protein Length | 1074 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 639723765 |
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| Product | carbamoyl-phosphate synthase large subunit |
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| Protein accession | YP_866915 |
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| Protein GI | 117926298 |
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| COG category | [E] Amino acid transport and metabolism
[F] Nucleotide transport and metabolism |
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| COG ID | [COG0458] Carbamoylphosphate synthase large subunit (split gene in MJ) |
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| TIGRFAM ID | [TIGR01369] carbamoyl-phosphate synthase, large subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCAAAC GTACCGATCT AAAAAAAATC ATGCTCATTG GCTCGGGACC CATCGTCATC
GGGCAGGCTT GTGAGTTCGA CTATTCAGGT GCACAAGCTT GTAAAGCTCT AAAAGAAGAG
GGTTATGAAG TGGTGTTGGT GAACTCCAAC CCCGCCACCA TCATGACCGA TCCCGAGCTG
GCCGACCGTA CCTATGTGGA GCCGATCACC TTGGCGTCGG TGACGCGCAT TATCGCCAAA
GAGCGCCCCG ATGCGATTCT CCCCACCATG GGGGGGCAGA CCGCCCTGAA CATGGCCCTT
AACTTGGCCG ATGCGGGGGT GCTGGAGCAG TACAATGTGG AGCTCATTGG TGCCTCGCGG
GATGCCATCA GCAAAGCGGA GGATCGCGAA CGTTTCAAAC AGGCCATGGA TGATATTGGC
CTAGAGATGC CCAAATCTGG CTTTGCCCAC TCCATGGAAG AGGCGTGGGA GATCCAGACA
GAGGTCGGTT ACCCCACCAT TATCCGCCCC AGCTTTACCC TGGGGGGGAC CGGCGGCGGC
ATCGCTTATA ACTCGGAAGA GTTCGAGGAG ATTATCCGCC GTGGTTTGGC CGCCTCGCCC
ACCACAGAGG TGTTGGTGGA AGAGTCGGTG CTGGGCTGGA AAGAGTTTGA GATGGAGGTG
GTGCGGGATC GTCTGGATAA CGCCATCATC GTCTGTTCCA TCGAAAACTT TGACCCCATG
GGGGTGCATA CCGGGGACTC CATTACCGTG GCTCCGGCCC AGACCTTGAC CGATAAAGAG
TATCAGATTC TGCGGGATGT CTCCATCGCG GTGCTGCGTG AGATCGGTGT GGATACCGGC
GGTTCTAATG TGCAGTTTGC CATCCATCCA GAAAATGGGC GGCTGGTGGT CATTGAGATG
AACCCACGGG TCTCCCGCTC GTCGGCATTG GCTTCTAAGG CAACCGGTTT TCCCATCGCC
AAAGTAGCCG CCAAGCTGGC CATTGGTTAT ACCCTGCCGG AGATTATGAA CGACATTACC
GGCGTAACCC CGGCGTCGTT TGAGCCCACC ATCGACTATG TGGTGACCAA GATCCCCCGC
TTTACCTTTG AAAAATTCCC CCAAGCCAGC GCCCTGCTGA CCACCCAAAT GAAGTCGGTG
GGCGAGGCGA TGGCCATCGG GCGTACCTTT AAGGAGTCCT TGCAAAAGGC ATTGCGCTCC
ATGGAGATCG GCCTGGATGG CTTTGGCGAA ATTTTGGATG TGGCGGATGA GAGCTGGGAA
GCGGTGCTGG AAGAGCGGCT ACATAATCCT GGCCCAGATC GCATCCTTTA TGTGGCCGAG
GCGTTTCGCC AAGGTAAGGA TCTGGAGTGG TTAAATCGCG TGACTGCCAT TGACCCTTGG
TTCCTGGATC AAATTCAGCA GATTGTGGAG GCGGAAGCCT CTATTCGTGG GGTGAGCTTT
GAGAATATCT CCATCCCCCG CCTGCGTGAG CTTAAAGAGA TGGGCTTCTC CGATGCCCGC
TTGGCTCGCC TTACCCAAAC CAGTGACACA GCGGTACGGA CCAGCCGCTT GACCCATGGT
GTGGTGCCGG TGTTTAAACG GGTGGATACC TGTGGGGCCG AGTTTGCCTC GCAGACCGCC
TACCTCTACG CCACCTATGA GCAAGTATGT GAGGCTGCAC CAAGTAGCCG TAAAAAAATC
ATGATCTTAG GCGGCGGCCC TAACCGCATT GGTCAGGGTA TTGAGTTTGA TTATTGCTGT
GTGCATGCGG CCTTTGCCCT GCGGGATGTG GATTATGAGA CCATTATGGT CAACTGTAAT
CCTGAGACCG TCTCCACCGA TTATGACACC TCGGACCGTC TCTACTTTGA GCCGCTTACC
TTTGAAGATG TGATGACCAT TGTGGATATC GAGAAGCCCG ACGGGGTGAT CGTGCAATTT
GGTGGTCAAA CCCCCCTCAA GCTGGCGAAA CGGTTGGAGG CTGCCGGGGT GCCCATTATC
GGCACCACGC CCGAGGCCAT TGATGTGGCC GAGGATCGGG AACGTTTTCA GGTCTTGCTG
CAAAAGTTGG GCTTGCGTCA GCCCCCTAAT GGTATTGCCC GCTCTGAGCA AGAGGCGATT
CGCGAGGCGG AGGCCATTGG TTTCCCGGTG GTGGTACGGC CATCCTATGT GTTGGGTGGG
CGAGCCATGG AAATTGTACA CGATGTGAAG GATCTGGAGC GCTATATGCG CACGGCGGTG
CAGGCTTCGC CGGACCACCC TGTGCTGATT GACCACTTTC TCAGGGATGC CATTGAGATT
GATGTGGACT GTATTGCTGA CGGCAAAACG GCGGTGGTGG CAGGCATTAT GGAGCACATT
GAGGAGGCTG GTGTGCATTC CGGCGACTCG GCGTGCTCGT TGCCGCCCTA TTCGGTGGGG
CTGGATCTGA TCAATGAGAT CGAGCGGCAA ACCAAAATGT TGGCCGCCGC GCTGGAAGTC
AAAGGGTTGA TGAATATTCA GTTTGCGATC CAAAAGGGGG CGGTCTACAT TCTGGAGGTC
AACCCTCGTG CGTCCCGCAC GGTGCCCTTT GTCTCCAAGG CGACAGGGGT GCCCTTTGCC
AAGCTGGCCG CGCGGGTCAT GGCGGGAGAA AGCTTGCAAG AGTTGGGGTT AACCCACTCA
CCCAAGCTGG GGCATGTGGC GGTTAAAGAG GCGGTCTTCC CTTTTGAGAA GTTTATGAAT
GTGGACCCCG TGTTGGGGCC GGAGATGAAA TCCACCGGCG AGGTGATGGG GCTGGCGGAT
ACCTTTGGGG CGGCTTTTGC CAAGGCCCAA GAGGGGGCTG GGGTCTATTT GCCCATGGCG
GGCAAGTGTG CCAACCAGCG CATCTTTATC TCCGTTAAGG ATGAGGACAA ACACGCCATT
GTGATGCCAG CCAAACGTCT GGTGGAGATG GGCTATAAAC TAAGCGCCAC CAGCGGCACC
GCCCGCTTCC TGGAAGGGGA GGGGGTGCCT GTGGAGACCG TGAATAAGGT GACTGAAGGT
CGCCCCCACA TTGTGGATCA AATGAAGAGC AATGAGGTGG CGCTGGTCTT TAATACCACA
CAGGACAAAC GGGCGTTGGA AGACTCCTTC CCCATTCGTC GTACGGCGCT GATGAGTAAA
ATCCCCTATT TTACGACGGT TGCGGGTATG CGGGCGGCGG TTTCGGCCAT GGAAGCGATG
CGGGCCGGGG ACTTTAGTTG CAAGGCTTTG CAAGATTACT ATTGA
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| Protein sequence | MPKRTDLKKI MLIGSGPIVI GQACEFDYSG AQACKALKEE GYEVVLVNSN PATIMTDPEL
ADRTYVEPIT LASVTRIIAK ERPDAILPTM GGQTALNMAL NLADAGVLEQ YNVELIGASR
DAISKAEDRE RFKQAMDDIG LEMPKSGFAH SMEEAWEIQT EVGYPTIIRP SFTLGGTGGG
IAYNSEEFEE IIRRGLAASP TTEVLVEESV LGWKEFEMEV VRDRLDNAII VCSIENFDPM
GVHTGDSITV APAQTLTDKE YQILRDVSIA VLREIGVDTG GSNVQFAIHP ENGRLVVIEM
NPRVSRSSAL ASKATGFPIA KVAAKLAIGY TLPEIMNDIT GVTPASFEPT IDYVVTKIPR
FTFEKFPQAS ALLTTQMKSV GEAMAIGRTF KESLQKALRS MEIGLDGFGE ILDVADESWE
AVLEERLHNP GPDRILYVAE AFRQGKDLEW LNRVTAIDPW FLDQIQQIVE AEASIRGVSF
ENISIPRLRE LKEMGFSDAR LARLTQTSDT AVRTSRLTHG VVPVFKRVDT CGAEFASQTA
YLYATYEQVC EAAPSSRKKI MILGGGPNRI GQGIEFDYCC VHAAFALRDV DYETIMVNCN
PETVSTDYDT SDRLYFEPLT FEDVMTIVDI EKPDGVIVQF GGQTPLKLAK RLEAAGVPII
GTTPEAIDVA EDRERFQVLL QKLGLRQPPN GIARSEQEAI REAEAIGFPV VVRPSYVLGG
RAMEIVHDVK DLERYMRTAV QASPDHPVLI DHFLRDAIEI DVDCIADGKT AVVAGIMEHI
EEAGVHSGDS ACSLPPYSVG LDLINEIERQ TKMLAAALEV KGLMNIQFAI QKGAVYILEV
NPRASRTVPF VSKATGVPFA KLAARVMAGE SLQELGLTHS PKLGHVAVKE AVFPFEKFMN
VDPVLGPEMK STGEVMGLAD TFGAAFAKAQ EGAGVYLPMA GKCANQRIFI SVKDEDKHAI
VMPAKRLVEM GYKLSATSGT ARFLEGEGVP VETVNKVTEG RPHIVDQMKS NEVALVFNTT
QDKRALEDSF PIRRTALMSK IPYFTTVAGM RAAVSAMEAM RAGDFSCKAL QDYY
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