| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_3012 |
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| Symbol | |
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| ID | 4483617 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Magnetococcus sp. MC-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008576 |
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| Strand | + |
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| Start bp | 3766908 |
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| End bp | 3768194 |
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| Gene Length | 1287 bp |
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| Protein Length | 428 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 639723759 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_866909 |
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| Protein GI | 117926292 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.000000172152 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATCCGT TGGCATTAAC CTTTCGTCGT TTTTCCATTG CCCAACTCTT ATTAGCCGCG
CTCATGGTGC TGCTCACTTG TGCTGCTATG GCCATCTATT TGGCTTCTGA CATTCTTACG
CAGAGATCTA TTGATGAATT AGCGGCCAAG CAGGCGCGCA AGACCTCTCA ATTGATTTTT
CAAAGCCTCT ACGGGGTGAT GCAAAAAGGG TGGATTAAAC ATGATATTCA GGATGTCGTG
ACACGCATTC ACTATACCTT GCCTGAGATT GACATACATT TGGTGCGCAA CAAGAAACTC
GCGGAGATGT TTGGCGAGAG TGAATACTCT TTGGAGCAGC GGGAACACTC CGCCCAGGTC
AACCAAGTCA TGGAGAGCGG GCAAGAGTTA TTGCGAGCCG AGGCTGACCG GTTGCATTTT
ATCTACCCCT TGGTGGCCGA TGAAGGGTGC ATTAAGTGCC ACACCAATGT GCAAGAAGGC
TATGTCAACG GGGTGATCCA CATTACCTTT CCTCTTAAAG AGCTTAAAGT ACCGTTATCC
TTTGCGCTGA CCAATATCAT CCATATTTTT GGGGTGATAA CTCTGCTGAT TTTGCTCATC
CAATTTTTTG TGTTCAGACG TTTTTTTGTA CAACCCATCA TGAACCTTAC CGAGCATATT
TTAACCATAC GTGAAACCCG TGAGCTACCC TCACAAAAAA CACTGCGCGA CTCGCCCACG
TGGTTTCGGG AGTTGCACCA CCTTACGGAA AATTTTTGTG ACCTGATGCA AAATTTAAAC
AGTGCACAAA ATCGGTTACG GGATCAATCG GAGCGGGATG AGCTCACGGG GCTGTTTAAC
CGCCGATTTT TTAACCGCAC CTTTGCCGCC GAGTTGAGCC GCGCCAAACG CTACAAGCAC
TCGGTTGCGC TGTTTATGCT GGATCTCAAT GGTTTTAAAC CCATTAATGA CACCTACGGC
CATGGTGCCG GGGATGCGAT TTTACAAGCC TTGGGTCGGG AGATGCAGAA CAAGTTGCGG
GATAACGATA TTATTGCCCG TGTGGGGGGG GATGAGTTTG TGGTGTTAGC GCCTGAGATT
GGCAGTCAGG GAGCCAGCCA GTTTGAAGAG AAACTGCGTA GTTTAATTGA ACAAACCACC
ATTGTTTATG AAGGGGAGCA GCTTAGTGTG GGCACCAGTA TAGGGGTTGC CCTCTACCCC
GATCATGGGG ATGAGGCCAA GCAGCTACTG GATTTTGCCG ACGAGGCCAT GTATGCCGAT
AAACGCCGCC GTAAAGGGTT AGCGTAA
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| Protein sequence | MNPLALTFRR FSIAQLLLAA LMVLLTCAAM AIYLASDILT QRSIDELAAK QARKTSQLIF
QSLYGVMQKG WIKHDIQDVV TRIHYTLPEI DIHLVRNKKL AEMFGESEYS LEQREHSAQV
NQVMESGQEL LRAEADRLHF IYPLVADEGC IKCHTNVQEG YVNGVIHITF PLKELKVPLS
FALTNIIHIF GVITLLILLI QFFVFRRFFV QPIMNLTEHI LTIRETRELP SQKTLRDSPT
WFRELHHLTE NFCDLMQNLN SAQNRLRDQS ERDELTGLFN RRFFNRTFAA ELSRAKRYKH
SVALFMLDLN GFKPINDTYG HGAGDAILQA LGREMQNKLR DNDIIARVGG DEFVVLAPEI
GSQGASQFEE KLRSLIEQTT IVYEGEQLSV GTSIGVALYP DHGDEAKQLL DFADEAMYAD
KRRRKGLA
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