| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_2994 |
|---|
| Symbol | |
|---|
| ID | 4482722 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Magnetococcus sp. MC-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008576 |
|---|
| Strand | + |
|---|
| Start bp | 3746429 |
|---|
| End bp | 3747007 |
|---|
| Gene Length | 579 bp |
|---|
| Protein Length | 192 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 639723741 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_866891 |
|---|
| Protein GI | 117926274 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.0000368785 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGATTCT TAAAGAACTT GTTCGCATTA GTTGGGGCCC TTGCTATCGC AGCTGGTCTC
TATGGTTATG TCAAGCTGGC CCCTGTTTTG GCAGAGTTTG ATCCTGGCTA CCAGAAGATG
TACTCAAAGT TTGCCTCGGA TCTCTTGACC TCCAAAGACC CTGGCGTGGC GATGATGTGG
GTGGCCGAGG TCAAACCTGA TATCTCTATT GAAGATGTCA AGGAGTCTCT GAAAAGTTTG
GCCGCAGCAC GTAGCTTTTT GTTTGTGGGA GAGGCTCCTT TTTACAAACA GGTCCAGGCT
TTAACCGGCG AGCCTTACCG TCATATTTCT TTCATGTCTT TTTGTGACGC CAGTGTCGGC
AAAATGATGG CCGATTATCG GGATGAGTAT ACCGGCTTTA TGCCCTGTCG TATCTCTGTT
GTGCAGGGTA AGGATGGTAA AATCCGTTTA TACTCTATGA ACTTAGATAT GATGATTTAC
GGCGGACGGG AGCTCCCCCC AGAACTCAAG AAGCAAGCCA TGCGGGTGAG TAATGTCATT
CGTGAGATTA TGCAAGGCGC GGCCCAAGGG GAATTTTAA
|
|---|
| Protein sequence | MGFLKNLFAL VGALAIAAGL YGYVKLAPVL AEFDPGYQKM YSKFASDLLT SKDPGVAMMW
VAEVKPDISI EDVKESLKSL AAARSFLFVG EAPFYKQVQA LTGEPYRHIS FMSFCDASVG
KMMADYRDEY TGFMPCRISV VQGKDGKIRL YSMNLDMMIY GGRELPPELK KQAMRVSNVI
REIMQGAAQG EF
|
|---|
| |