Gene Mmc1_2992 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmc1_2992 
Symbol 
ID4482720 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMagnetococcus sp. MC-1 
KingdomBacteria 
Replicon accessionNC_008576 
Strand
Start bp3744214 
End bp3744693 
Gene Length480 bp 
Protein Length159 aa 
Translation table11 
GC content49% 
IMG OID639723739 
Productnucleoside diphosphate kinase 
Protein accessionYP_866889 
Protein GI117926272 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0105] Nucleoside diphosphate kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000780378 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGCCCT GCTTGTTCAT GCTGGCGGTG TTTTTTCATC AGGAGTTTAC CATGACCATT 
GAACGCACTT TTTCCATCAT CAAACCTGAC GCAGTTGCTA AAAATGTCGT AGGGGAGATC
CAAAGCCGTT TCGAGAAAGC GGGCCTGCGT ATTATTGCTT CTAAAATGAT TCGCCTAACG
CCTGAAATTG CAGGAAAATT CTATGAAGTG CATAAAGCAC GCCCCTTCTA CAATGATCTG
TGCAGCTACA TGAGCTCAGG CCCTGTGGTT GTGCAAGTTT TAGAAGGTGA TGGCGCTGTC
CTGAAAAACC GTGACATTAT GGGTGCCACC AATCCTAAGG ACGCCGCTCC AGGTACCATC
CGTGCTGATT TTGCCGAGAG CATTGATGCC AATGCGGTCC ATGGTTCAGA CGCCCCTGAA
ACGGCTGCCC AAGAAATCGC CTTCTTCTTT AGTGGCACAG AACTGTGCGA TCGCCCTTGA
 
Protein sequence
MLPCLFMLAV FFHQEFTMTI ERTFSIIKPD AVAKNVVGEI QSRFEKAGLR IIASKMIRLT 
PEIAGKFYEV HKARPFYNDL CSYMSSGPVV VQVLEGDGAV LKNRDIMGAT NPKDAAPGTI
RADFAESIDA NAVHGSDAPE TAAQEIAFFF SGTELCDRP