| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_2990 |
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| Symbol | |
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| ID | 4482718 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Magnetococcus sp. MC-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008576 |
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| Strand | - |
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| Start bp | 3741300 |
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| End bp | 3742604 |
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| Gene Length | 1305 bp |
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| Protein Length | 434 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 639723737 |
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| Product | outer membrane efflux protein |
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| Protein accession | YP_866887 |
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| Protein GI | 117926270 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01844] type I secretion outer membrane protein, TolC family |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.0000000136016 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTTTTGA AACGTTTCGT TAAAAACGCC ATCGTCGTCG GCGTCGCTTC GGTCTCTATG
GTCGGTGTGG CGCAGGCCAA CGATCTTCCC GAGTTGTTGC GCGGGTTGAT CCAAACCAAT
GCGGAGGTAA AATCTGCTGA AGCCAAGCTT GGCGGCGCGA AAAGCGACGT CAGCTCCAAA
AAAGGTGAAT GGTTTCCAAC CGTCACTGTG AACGCAAAAA TTGGTCATGA GGGTACCAAC
CAAGGGGCGA CACCCTTTAC TGATGCGCGT TCTAGTGAGC TGAAAACCAG CTTTGATCAG
TTGTTGTGGG ACTTTGGTCA GCTGAATGCC GAAATAGACG CCGAGCGTGC CAACCAAATC
GGCAAAGAGT ACTCGGTCAG TCAAACGACC CAAAAAGTGC TGCGTTCCGG TGCCAAGGCT
TACATCGATT TGGTTGCCGC TTACCGCGTG CTGGAAAATA CCAAAGCGGT AGAGGGCCGT
ATTCGTGAAC AGACCGCTTC CGAAGAAAAG CGTCTAAAAA TCGGTGCTGG CTTGCGCAAA
GATGTTTTGC AAAGCGAGGC TGAGCTAAGC CGGGCCATCG AAAAGCGGTT AAAAGCGGAG
CTGAATTTGG CGAAGGCCAT GAACGGCTAT CGCCAGTGGT TCAATGTTGT GCCTGACGAT
CTCTCTAAAT TGAACATGGT CGATGTCAAC GTTGAGATTC CCTCAATGGA GGACATGATT
GCGCAGTTTG AAGCCCAAAA CTACGCCTTG CTTGAGACAA AGCAAAACAT CGTTAAGGCT
GTCGCGAGCA AAAATTCTAC CCGCGCCAAA GGCTATTTTC CTGAGGTTAC GCTGACGGGT
AGCTATACCT TCCAAAACGA TATGGGGGGC ACTGTAAACT ATGATGAGGA CACCTCCATC
CTCGTCAATG TCAAGATGCC TTTCAACTTG GGCCTTGCTG CGGTGCACGA TGTTAATTCG
GCACAGCATA AAGTGGAGGA TTTTCAGGCT ATTCACGACA AAGCTCGTGA TGCGTTAGAG
AAAAATCTTC GTGATACCTA CCAAAAGCTG ATTACGAGCA AAGAGTTAGT CGATCGTTAT
CAGCAAAGTG TTAAGTTGAA CGAGGATTTT CTGACATTGG CCCGCAAAGA GCGCAAGCTT
GGTGGTGGTA GCATGTCTTC TCTGCTTAGT ATTCTCATTG CTGAGCGCAA AGTGATTGAA
GCGAACTCTG ACCTAGAAGA ATCCAAGGCA GACGTGGTGA GTGCAAAGGT TGAGCTCCTC
GAAGCCATTG GACGCCTGAG CCCCGATCTG TTTGTGCAAC AGTAA
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| Protein sequence | MLLKRFVKNA IVVGVASVSM VGVAQANDLP ELLRGLIQTN AEVKSAEAKL GGAKSDVSSK
KGEWFPTVTV NAKIGHEGTN QGATPFTDAR SSELKTSFDQ LLWDFGQLNA EIDAERANQI
GKEYSVSQTT QKVLRSGAKA YIDLVAAYRV LENTKAVEGR IREQTASEEK RLKIGAGLRK
DVLQSEAELS RAIEKRLKAE LNLAKAMNGY RQWFNVVPDD LSKLNMVDVN VEIPSMEDMI
AQFEAQNYAL LETKQNIVKA VASKNSTRAK GYFPEVTLTG SYTFQNDMGG TVNYDEDTSI
LVNVKMPFNL GLAAVHDVNS AQHKVEDFQA IHDKARDALE KNLRDTYQKL ITSKELVDRY
QQSVKLNEDF LTLARKERKL GGGSMSSLLS ILIAERKVIE ANSDLEESKA DVVSAKVELL
EAIGRLSPDL FVQQ
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