Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmc1_2990 |
Symbol | |
ID | 4482718 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Magnetococcus sp. MC-1 |
Kingdom | Bacteria |
Replicon accession | NC_008576 |
Strand | - |
Start bp | 3741300 |
End bp | 3742604 |
Gene Length | 1305 bp |
Protein Length | 434 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 639723737 |
Product | outer membrane efflux protein |
Protein accession | YP_866887 |
Protein GI | 117926270 |
COG category | [M] Cell wall/membrane/envelope biogenesis [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1538] Outer membrane protein |
TIGRFAM ID | [TIGR01844] type I secretion outer membrane protein, TolC family |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.0000000136016 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTTTTGA AACGTTTCGT TAAAAACGCC ATCGTCGTCG GCGTCGCTTC GGTCTCTATG GTCGGTGTGG CGCAGGCCAA CGATCTTCCC GAGTTGTTGC GCGGGTTGAT CCAAACCAAT GCGGAGGTAA AATCTGCTGA AGCCAAGCTT GGCGGCGCGA AAAGCGACGT CAGCTCCAAA AAAGGTGAAT GGTTTCCAAC CGTCACTGTG AACGCAAAAA TTGGTCATGA GGGTACCAAC CAAGGGGCGA CACCCTTTAC TGATGCGCGT TCTAGTGAGC TGAAAACCAG CTTTGATCAG TTGTTGTGGG ACTTTGGTCA GCTGAATGCC GAAATAGACG CCGAGCGTGC CAACCAAATC GGCAAAGAGT ACTCGGTCAG TCAAACGACC CAAAAAGTGC TGCGTTCCGG TGCCAAGGCT TACATCGATT TGGTTGCCGC TTACCGCGTG CTGGAAAATA CCAAAGCGGT AGAGGGCCGT ATTCGTGAAC AGACCGCTTC CGAAGAAAAG CGTCTAAAAA TCGGTGCTGG CTTGCGCAAA GATGTTTTGC AAAGCGAGGC TGAGCTAAGC CGGGCCATCG AAAAGCGGTT AAAAGCGGAG CTGAATTTGG CGAAGGCCAT GAACGGCTAT CGCCAGTGGT TCAATGTTGT GCCTGACGAT CTCTCTAAAT TGAACATGGT CGATGTCAAC GTTGAGATTC CCTCAATGGA GGACATGATT GCGCAGTTTG AAGCCCAAAA CTACGCCTTG CTTGAGACAA AGCAAAACAT CGTTAAGGCT GTCGCGAGCA AAAATTCTAC CCGCGCCAAA GGCTATTTTC CTGAGGTTAC GCTGACGGGT AGCTATACCT TCCAAAACGA TATGGGGGGC ACTGTAAACT ATGATGAGGA CACCTCCATC CTCGTCAATG TCAAGATGCC TTTCAACTTG GGCCTTGCTG CGGTGCACGA TGTTAATTCG GCACAGCATA AAGTGGAGGA TTTTCAGGCT ATTCACGACA AAGCTCGTGA TGCGTTAGAG AAAAATCTTC GTGATACCTA CCAAAAGCTG ATTACGAGCA AAGAGTTAGT CGATCGTTAT CAGCAAAGTG TTAAGTTGAA CGAGGATTTT CTGACATTGG CCCGCAAAGA GCGCAAGCTT GGTGGTGGTA GCATGTCTTC TCTGCTTAGT ATTCTCATTG CTGAGCGCAA AGTGATTGAA GCGAACTCTG ACCTAGAAGA ATCCAAGGCA GACGTGGTGA GTGCAAAGGT TGAGCTCCTC GAAGCCATTG GACGCCTGAG CCCCGATCTG TTTGTGCAAC AGTAA
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Protein sequence | MLLKRFVKNA IVVGVASVSM VGVAQANDLP ELLRGLIQTN AEVKSAEAKL GGAKSDVSSK KGEWFPTVTV NAKIGHEGTN QGATPFTDAR SSELKTSFDQ LLWDFGQLNA EIDAERANQI GKEYSVSQTT QKVLRSGAKA YIDLVAAYRV LENTKAVEGR IREQTASEEK RLKIGAGLRK DVLQSEAELS RAIEKRLKAE LNLAKAMNGY RQWFNVVPDD LSKLNMVDVN VEIPSMEDMI AQFEAQNYAL LETKQNIVKA VASKNSTRAK GYFPEVTLTG SYTFQNDMGG TVNYDEDTSI LVNVKMPFNL GLAAVHDVNS AQHKVEDFQA IHDKARDALE KNLRDTYQKL ITSKELVDRY QQSVKLNEDF LTLARKERKL GGGSMSSLLS ILIAERKVIE ANSDLEESKA DVVSAKVELL EAIGRLSPDL FVQQ
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