| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_2989 |
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| Symbol | |
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| ID | 4482717 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Magnetococcus sp. MC-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008576 |
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| Strand | - |
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| Start bp | 3733545 |
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| End bp | 3740954 |
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| Gene Length | 7410 bp |
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| Protein Length | 2469 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 639723736 |
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| Product | hemolysin-type calcium-binding region |
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| Protein accession | YP_866886 |
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| Protein GI | 117926269 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3064] Membrane protein involved in colicin uptake |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGAAC AGACTGGGCA GAATGATATG GTTAACAACG AAGGTGAGAT CCTTCTGGCT
CAAGCTGATA CTACCGATCA GGCTTCCGCG TCTGGCGGGT CAGATGATGC AACGCAGGCC
GGTACCGGTC AGGGTGGGGC AGCGGCACAA GGTCAGGCCA AAGGTCAAGG TCAAGGCCAG
GGTCAAGGCC AGGGTCAAGG CCAAGGCCAG GGTGAAGGCC AAGGTCAGGG TGAAGGCCAG
GGCCAGGGTA AAGGCCAGGG CCAGGGTGAA GGCCAAGGTG TTTTGCTCCC AGGAAAGCAG
GGTAAGGACA AAGAATTAGA AAAAGAGGAT GGTAAAGGCG CCGCTGACGG TGAGCCAGAT
GCAACCGAAG GTGGGGGCGG GGAAGGCGTC GGTGCCGAGG CCACTGGAGC TGACGGCGAG
GCCACTGGAG CTGACGGCGA GGCCACTGGA GCTGACGGCG AGGCCACTGG AGCTGACGGC
GAGGCTGCTG GAGCTGACGG CGAGGCCACT GGAGCTGACG GCGAGGCTGC TGGGACCGAT
GGCACAGACG CTGAGTCTGA GGCAGAGGCA GAGGCAGAGG CAGAGGCAGA GGCTGAGGCC
CAAGCTGAAG CAGACGCAGA AGCCGATGCC GAGGCTGAGG CTGAGGCTGA GGCTGAGGCT
GAGGCTGAAG CTGAGGCAGA GGCCGCAGGT GACGAGGGTA TGGATGCCAT TTTGGCGGAA
ATTCAGGCTG ATAGTGATGA TGCCGCAGGG GACGAACCAG AACCCGATGC CGAACCCGAT
GCCGAGCAAG AACCCGATCC TATCATTGAG CCAGACTATC TAGATATCGG AGAGGATCTG
GATTTATCTG ATCTCGAATT AGAAGGCATT ACCACGCTTT ATCTCGATGA TGGTATTACC
ATCACCACGA ATGTCGAAAC GTTAATGGGG TCGGCCAGTA ATATTTCCAG CTTTGATGGG
GCAGGGGATG TTGATTTAGC CAACAATACC ACCATTGGCA ATGGTGATGG TTTAAATGCT
GTTGTCAAAA TTGTAGACAC CGCAGCCAAT ATCGAAACTT TGACGGACCA AGAGCTACAG
GAGTGGTCCC AAGCCGGTAT TAATGCCATT GAAATTACCA GTGGCCAGCT GAGCATTGAA
GGTTCCATTG CAGAACTCTT CATTCTTTCG ACCTCCGGCG GGACCGTCAA CATTACGGAT
TCTTCCTCCA CGGTAGAAGC CTCAACTCTG TATGCAACAA CAGGGGATGA TACGGTAACT
GCGGATGACG GTGGTGATGC GCTTTATGGT CTGGACGGTA ACGATACCCT AACGGGTGGT
GCGGGAGATG ATACGCTTAA TGGCGGTGCA GGTGCCGATA TTATGTACGG CGGTGATGGT
GCCGATACCT TTGTCTTTAA TACTGACGAT GTAACATCGA CAGACGCAGA GACGATCTAT
GGTGGTGATC TGTCAGGTGA TACCAGCACC GGTGATATCA TCCATGTGGT TACCAATACC
ATAGATTTTA CAGGCTCAAC CATCATCGGC ATTGACTACT TTAAAATTGA AAGTGGTCAA
GTTGCCATTA TTGATAGTGA TGAGCTTTCG ACCAAGGACA TCACGCTGAT GGATGGTGAT
GTGGGTGCTG GCACACTGCG TATCACTTTA CAAAGTGATG GGGATGACAG TGCGGATTTG
AGCCTGCTTG ATGTGAGCGG AGCAGGTGTT ATTCAGTTTT ATCTGACAGC TAATACCGAT
ATTACCGGAA TGGCGCTCAA TACGAACACC ATCTATACGG TCTCCACATC GGCCAGTGAA
GTGCTTTCGC TCTCTATGAC TCAAATGGAG CGTTTTTCTG GGCTAAGTGA CGGATCGTAT
CTGGTTAAAG ACACGGCCGC CGCGCTGGTT GCCAATACCA ACAGCTATGT GACGGGTTCT
GCAAGTGTCA GTGTTACGGA CACGATTACA ATGGCGCAAC TCTCGGCCAT TGATCAGGAT
ACTACGGGTA CCCTGACCTA TGCGGCGGGC CTAAAGGACG GTGCCTCAGC ACTAGCGGCC
AACACTAACA GTTATGTTAC AGGTAGCTAT GTGGTATCTG TAACCGATGC AGCCACCATG
GCAGAGCTTT CGGCCATAGA TACGGCGACC TCGGGCACGT TGACCTATGG TTCAGGTTTG
AAAGATAGCG CATCCGAACT AGACGCCAAC ACCAATAGCT ATGTGACCGG TGCATTGGCC
GTTTCTGTTA CAGATGCGGC ATCCATAGCA CAGTTATCCT CGATTGACCA GGATACCACG
GGCACACTGA CCTACGGTGC GGGTTTGAAA GATGCTGCGG CGGCACTGGA AACCAATACC
AATAGCTATG TTACCGGATC GCTAGCCGTC TCCATTACAG ATGCCGCCAC TATGGCGCAG
TTGTCGGCCA TTGATCAGGA TACCACGGGT ACGCTGGCTT ATGGTGCGGG TTTGAAAGAT
GCCGCTGCGG CGCTGGAAGC CAATACCAAC AGCTATGTGA CGGGCAGTTA TGTGGTCTCC
ATCACCGATG CGGCCACAAT GGCGCAGTTG TCGGCCATTG ATCAGGATAC CTCCGGAGCG
TTGACCTACG GTGCGGGCTT ACAGGATGGG GTTTCTGCCC TTGATGCCAA CACCAACAGC
TATGTAACGG GCAGCTATGC TGTCTCCATC ACTGATGTGG TGACCATGGC GCAGTTGTCC
TCTATTGATC AGGATACCAC CGGTGCGTTG ACCTATGGTT CCGGCTTAAA GGACAGTGCA
GCCGCGCTGG CCGCTAATAC CAACAGCTAT GTGACAGGTT CCTATGCTGT TTCTGTAACG
GATGTGGCCA CCATGGCGGA GTTGTCAGCC ATGGATGCGG CAACTTCTGG CACGTTGACC
TATGGTTCCG GATTGAAAGA TAGCGCATCA GCGCTGGCCG CCAACACAAA CAGCTATGTG
ACGGGTGCGT TGGCTGTTTC TGTTACGGAT GCGGCCACCA TGGCGCAGTT GTCGGCCATT
GATCAGGATA CCACTGGAGC GCTGATCTAC GGTGCGGGTT TGAAGGATGG TGTTACCGCC
CTGGATGCCA ACACCAACAG CTATGTGACA GGTAGTTATG CGGTTTCCAT CACCGATGCG
GCCACCATGG CGCAGTTGTC GGCCATTGAT CAGGATACCA CTGGAGCGCT GACCTACGGT
GCGGGTTTGA AAGATGCCGC TGCGGCCCTG GAAACCAATA CCAACAGCTA TGTGACGGGC
AGCTATGTGG TTTCGATCAC CGATGCGGCC ACCATGGCGC AGTTGTCGGC CATTGATCAG
GATACCACCG GAGCGTTGAC CTACGGTGCG GGTTTGAAAG ATGCCGCTGC GGCGCTGGAA
ACCAATACCA ACAGCTATGT GACGGGTAGT TATGCGGTCT CCATCACCGA TGCGGCCACC
ATGGCGCAGT TGTCTGCCAT TGATCAGGAT ACCACTGGAG CGCTGACCTA CGGTGCGGGT
TTGAAAGATA CCGCTGCGGC CCTGGAAGCC AATACCAACA GCTATGTGAC GGGCAGCTAT
GTGGTTTCGA TCACCGATGC GGCCACCATG GCGCAGTTGT CGGCCATTGA TCAGGATACC
ACCGGTACCC TGAGCTATGG TGCAGGCTTG AAGGATAGTG CAGCGGCCCT AGCCGCCAAC
ACCAATAGCT ACATTACGGG CAGCTATGTG GTCTCCGTTA CCGATGCGGC CACCATGGCG
CAACTTTCGG TCATGGATAC CGCCACCAGC GGCACCCTGA GCTACGGTGC GGGCTTGAAG
GACGGTGTTG CGGCACTGGA TGCCAATACC AACAGCTACG TGACCGGTTC TTACCTCGTT
TCCATCACCG ATGCGGCCAC CATGGCGCAG TTGTCGGCCA TTGATCAGGA TACCACCGGA
GCGCTGACCT ACGGTGCGGG TTTGAAAGAT GCCGCTGCGG CGCTGGAAGC CAATACCAAC
AGCTATGTGA CAGGCAGCTA TGCGGTCTCG ATAACCGATG CGGCCACCAT GGCGCAGTTG
TCGGCCATTG ATCAGGATAC TACTGGAGCG CTGACCTACG GTGCGGGTCT GAAGGATGGT
GTTGTCGCGC TGGAAGCCAA TACCAACAGC TATGTGACAG GCAGCTATGC GGTCTCGATA
ACCGATGCGG CCACCATGGC GCAGTTGTCG GCCATTGATC AGGATACTAC TGGAGCGCTG
ACCTACGGTG CGGGTCTGAA GGATGCTGCT GCGGCGCTGG AAGCCAATAC CAACAGCTAC
GTGACAGGCA GCTATGCAGT CTCCATTACC GATGCGGCCA CCATGGCGCA GTTGTCTGCC
ATTGATCAGG ATACCACTGG AGCGCTGACC TACGGTGCGG GTTTGAAAGA TACCGCTGCG
GCCCTGGAAG CCAATACCAA CAGCTATGTG ACGGGCAGCT ATGTGGTCTC CGTTACCGAT
GCGGCCACCA TGGCGCAGCT GTCGGCCATT GATCAGGATA CCACCGGTGC GTTGACCTAC
GGTGCAGGTT TGAAAGATGC CGCTGCGGCG CTGGAAGCCA ATACCAACAG CTATGTGACG
GGCAGCTATG TGGTTTCGAT CACCGATGCG GCTACCATGG CGCAGTTGTC GGCCATTGAT
CAGGATACCA CCGGAGCGCT GACCTACGGT GCGGGTTTGA AAGATGCCGC TGCGGCGCTG
GAAGCCAATA CCAACAGCTA TGTGACGGGC AGCTATGCGG TCTCGATAAC CGATGCGGCC
ACCATGGCGC AGTTGTCGGC CATTGATCAG GATACTACTG GAGCGCTGAC CTACGGTGCG
GGTCTGAAGG ATGGTGTTGT CGCGCTGGAA GCCAATACCA ACAGCTATGT GACGGGTAGT
TATGCAGTCT CCATTACCGA TGCGGCCACC ATGGCGCAGT TGTCGGCCAT TGATCAGGAT
ACTACTGGAG CGCTGACCTA CGGTGCGGGT CTGAAGGATG CTGCTGCGGC GCTGGAAGCC
AATACCAACA GCTACGTGAC AGGCAGCTAT GCAGTCTCCA TTACCGATGC GGCCACCATG
GCGCAGTTGT CGGCCATTGA TCAGGATACC ACTGGAGCGC TGACCTACGG TGCGGGTTTG
AAAGATACCG CTGCGGCCCT GGAAGCCAAT ACCAACAGCT ATGTGACGGG CAGCTATGTG
GTCTCCGTTA CCGATGCGGC CACCATGGCG CAGCTGTCGG CCATTGATCA GGATACCACC
GGTGCGTTGA CCTACGGTGC AGGTTTGAAA GATGCCGCTG CGGCGCTGGA AGCCAATACC
AACAGCTATG TGACGGGCAG CTATGTGGTT TCGATCACCG ATGCGGCTAC CATGGCGCAG
TTGTCGGCCA TTGATCAGGA TACCACCGGA GCGCTGACCT ACGGTGCGGG TTTGAAAGAT
GCCGCTGCGG CGCTGGAAGC CAATACCAAC AGCTATGTGA CCGGCAGCTA TGCGGTCTCC
ATCACCGATG CGGCCACCAT GGCGCAGTTG TCGGCCATTG ATCAGGATAC TACTGGAGCG
CTGACCTACG GTGCGGGTCT GAAGGATGCT GCTGCGGCCC TAGCCGCCAA CACCAACAGC
TACATTACGG GCAGCTATGT GGTCTCCGTT ACCGATGCGG CCACCATGGC GCAACTTTCG
GTCATGGATT CCGCCACCAG CGGCACCCTG AGCTACGGTG CGGGCTTGAA GGACGGTGTT
GCGGCGCTGG AAGCCAATAC CAACAGCTAC GTGACAGGCA GCTATGCAGT CTCCATCACC
GATGCGGCCA CCATGGCGCA GTTGTCGGCT ATTGACCAGG ATACCACTGG AGCGCTGACC
TACGGTGCGG GTTTGAAAGA TGCCGCTGCG GCGCTGGAAA CCAATACCAA CAGCTATGTG
ACGGGCAGCT ATGTGGTCTC CATCACCGAT GCGGCCACCA TGGCGCAGCT GTCGGCCATT
GATCAGGATA CCACCGGTGC GTTGACCTAC GGTGCGGGTT TGAAAGATGC CGCTGCGGCG
CTGGAAGCCA ATACCAACAG CTATGTGACG GGCAGCTATG TGGTTTCGAT CACCGATGCG
GCTACCATGG CGCAGTTGTC GGCCATTGAT CAGGATACCA CCGGAGCGCT GACCTACGGT
GCGGGTTTGA AGGATAGCGT TGTAGCGCTG GATGCCAATA CCAACAGCTA TGTGACAGGC
AGCTATGCGG TCTCGATAAC CGATGCGGCC ACCATGGCGC AGTTGTCGGC CATTGATCAG
GATACTACTG GAGCGCTGAC CTACGGTGCG GGTCTGAAGG ATGCTGCAGC GGCCCTAGCC
GCCAACACCA ACAGCTACAT TACGGGCAGC TATGTGGTCT CCGTTACCGA TGCGGCCACC
ATGGCGCAGC TTTCGGTCAT GGATACCGCC ACCAGCGGCA CCCTGAGCTA CGGTGCGGGC
TTGAAGGACG GTGTTGCGGC ACTGGATGCC AATACCAACA GCTACGTGAC CGGTTCTTAC
CTCGTTTCCA TCACCGATGC GGCCACCATG GCGCAGTTGT CGGCCATTGA TCAGGATACC
ACTGGAGCGC TGACCTACGG TGCGGGTTTG AAAGATGCCG CTGCGGCGCT GGAAGCCAAT
ACCAACAGCT ATGTGACGGG CAGCTATGTG GTCTCCATCA CCGATGCGGC CACCATGGCG
CAGCTGTCGG CCATTGATCA GGATACCACC GGTGCGTTGA CCTACGGTGC GGGTTTGAAA
GATGCCGCTG CGGCGCTGGA AGCCAATACC AACAGCTATG TGACGGGCAA CTATGTGGTT
TCGATCACCG ATGCGGCCAC CATGGCGCAG TTGTCGGCCA TTGATCAGGA TACCACCGGA
GCGCTGACCT ACGGTGCCGG TCTGAAGGAT AGCGTTGCAG CGCTGGATGC CAATACCAAC
AGCTATGTGA CGGGCAGCTA TGCGGTCTCC ATCACCGATG TGGTGACGAT GGCGCAGTTG
TCGGCCATTG ATCAGGATAC CACCGGTACC CTGAGCTATG GTGCAGGCTT GAAGGATGGT
GCAGCGGCCC TAGCCGCCAA CACCAACAGC TACATTACGG GCAGCTATGT TGTCTCCGTT
ACCGATGCGG CCACCATGGC GCAACTTTCG GTCATGGATA CCGCCACCAG CGGCACCCTG
ACCTACGGTG CGGGCTTGAA GGACGGTGTT GCGGCACTGG ATGCCAATAC CAACAGCTAC
GTGACCGGTT CTTACCTCGT TTCCATCACC GATGCGGCCA CCATGGCGCA GTTGTCGGCC
ATTGATCAGG ATCACTGGAG CGCTGACCTA CGGTGCGGGT TTGAAAGATG CCGCTGCGGC
GCTGGAAGCC AATACCAACA GCTATGTGAC GGGCAGCTAT GTGGTTTCGA TCACCGATGC
GGCCACCATG GCGCAGCTGT CGGCCATTGA
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| Protein sequence | MSEQTGQNDM VNNEGEILLA QADTTDQASA SGGSDDATQA GTGQGGAAAQ GQAKGQGQGQ
GQGQGQGQGQ GEGQGQGEGQ GQGKGQGQGE GQGVLLPGKQ GKDKELEKED GKGAADGEPD
ATEGGGGEGV GAEATGADGE ATGADGEATG ADGEATGADG EAAGADGEAT GADGEAAGTD
GTDAESEAEA EAEAEAEAEA QAEADAEADA EAEAEAEAEA EAEAEAEAAG DEGMDAILAE
IQADSDDAAG DEPEPDAEPD AEQEPDPIIE PDYLDIGEDL DLSDLELEGI TTLYLDDGIT
ITTNVETLMG SASNISSFDG AGDVDLANNT TIGNGDGLNA VVKIVDTAAN IETLTDQELQ
EWSQAGINAI EITSGQLSIE GSIAELFILS TSGGTVNITD SSSTVEASTL YATTGDDTVT
ADDGGDALYG LDGNDTLTGG AGDDTLNGGA GADIMYGGDG ADTFVFNTDD VTSTDAETIY
GGDLSGDTST GDIIHVVTNT IDFTGSTIIG IDYFKIESGQ VAIIDSDELS TKDITLMDGD
VGAGTLRITL QSDGDDSADL SLLDVSGAGV IQFYLTANTD ITGMALNTNT IYTVSTSASE
VLSLSMTQME RFSGLSDGSY LVKDTAAALV ANTNSYVTGS ASVSVTDTIT MAQLSAIDQD
TTGTLTYAAG LKDGASALAA NTNSYVTGSY VVSVTDAATM AELSAIDTAT SGTLTYGSGL
KDSASELDAN TNSYVTGALA VSVTDAASIA QLSSIDQDTT GTLTYGAGLK DAAAALETNT
NSYVTGSLAV SITDAATMAQ LSAIDQDTTG TLAYGAGLKD AAAALEANTN SYVTGSYVVS
ITDAATMAQL SAIDQDTSGA LTYGAGLQDG VSALDANTNS YVTGSYAVSI TDVVTMAQLS
SIDQDTTGAL TYGSGLKDSA AALAANTNSY VTGSYAVSVT DVATMAELSA MDAATSGTLT
YGSGLKDSAS ALAANTNSYV TGALAVSVTD AATMAQLSAI DQDTTGALIY GAGLKDGVTA
LDANTNSYVT GSYAVSITDA ATMAQLSAID QDTTGALTYG AGLKDAAAAL ETNTNSYVTG
SYVVSITDAA TMAQLSAIDQ DTTGALTYGA GLKDAAAALE TNTNSYVTGS YAVSITDAAT
MAQLSAIDQD TTGALTYGAG LKDTAAALEA NTNSYVTGSY VVSITDAATM AQLSAIDQDT
TGTLSYGAGL KDSAAALAAN TNSYITGSYV VSVTDAATMA QLSVMDTATS GTLSYGAGLK
DGVAALDANT NSYVTGSYLV SITDAATMAQ LSAIDQDTTG ALTYGAGLKD AAAALEANTN
SYVTGSYAVS ITDAATMAQL SAIDQDTTGA LTYGAGLKDG VVALEANTNS YVTGSYAVSI
TDAATMAQLS AIDQDTTGAL TYGAGLKDAA AALEANTNSY VTGSYAVSIT DAATMAQLSA
IDQDTTGALT YGAGLKDTAA ALEANTNSYV TGSYVVSVTD AATMAQLSAI DQDTTGALTY
GAGLKDAAAA LEANTNSYVT GSYVVSITDA ATMAQLSAID QDTTGALTYG AGLKDAAAAL
EANTNSYVTG SYAVSITDAA TMAQLSAIDQ DTTGALTYGA GLKDGVVALE ANTNSYVTGS
YAVSITDAAT MAQLSAIDQD TTGALTYGAG LKDAAAALEA NTNSYVTGSY AVSITDAATM
AQLSAIDQDT TGALTYGAGL KDTAAALEAN TNSYVTGSYV VSVTDAATMA QLSAIDQDTT
GALTYGAGLK DAAAALEANT NSYVTGSYVV SITDAATMAQ LSAIDQDTTG ALTYGAGLKD
AAAALEANTN SYVTGSYAVS ITDAATMAQL SAIDQDTTGA LTYGAGLKDA AAALAANTNS
YITGSYVVSV TDAATMAQLS VMDSATSGTL SYGAGLKDGV AALEANTNSY VTGSYAVSIT
DAATMAQLSA IDQDTTGALT YGAGLKDAAA ALETNTNSYV TGSYVVSITD AATMAQLSAI
DQDTTGALTY GAGLKDAAAA LEANTNSYVT GSYVVSITDA ATMAQLSAID QDTTGALTYG
AGLKDSVVAL DANTNSYVTG SYAVSITDAA TMAQLSAIDQ DTTGALTYGA GLKDAAAALA
ANTNSYITGS YVVSVTDAAT MAQLSVMDTA TSGTLSYGAG LKDGVAALDA NTNSYVTGSY
LVSITDAATM AQLSAIDQDT TGALTYGAGL KDAAAALEAN TNSYVTGSYV VSITDAATMA
QLSAIDQDTT GALTYGAGLK DAAAALEANT NSYVTGNYVV SITDAATMAQ LSAIDQDTTG
ALTYGAGLKD SVAALDANTN SYVTGSYAVS ITDVVTMAQL SAIDQDTTGT LSYGAGLKDG
AAALAANTNS YITGSYVVSV TDAATMAQLS VMDTATSGTL TYGAGLKDGV AALDANTNSY
VTGSYLVSIT DAATMAQLSA IDQDHWSADL RCGFERCRCG AGSQYQQLCD GQLCGFDHRC
GHHGAAVGH
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