| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_2970 |
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| Symbol | |
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| ID | 4483488 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Magnetococcus sp. MC-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008576 |
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| Strand | + |
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| Start bp | 3685792 |
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| End bp | 3686793 |
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| Gene Length | 1002 bp |
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| Protein Length | 333 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 639723717 |
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| Product | glyceraldehyde-3-phosphate dehydrogenase |
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| Protein accession | YP_866867 |
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| Protein GI | 117926250 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0057] Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase |
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| TIGRFAM ID | [TIGR01534] glyceraldehyde-3-phosphate dehydrogenase, type I |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.376556 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGTCA CCATAGGTAT CAATGGCTTT GGCCGCATGG GCCGTCTGGT CTTACGGGCA
GGCTGGAACA GCCCAGGCAT TATCTGGGGG CCGATTAACG AGACCAGTAC CGATGCCCAC
GGCTCCGCCC ACCTGCTCCA GTTTGATTCG GTACACGGCA GGTGGCAACA CCCTTGCACG
GCCCAACAGG GGGAGATCTG CATTGAGGAT AGCCGCATCC CTTACCACAG CGTGGCCGAT
ATTGATGCCC ACCACTGGTC AACCTGCGAT CTGGTGATTG AAGCCACCGG CAAACACCAC
AAACAGCCCC ACACCCTACA GCGCTATTTT GAGCAAGGGG TTAAAAAGGT GTTGGTGGCC
GCTCCAACCG AGGGGGCCCT CAACCTGGTC TACGGCGTCA ATGATCACCT CTACCAGCCC
CAGCAGCACC ATCTTGTCAC CGCAGCCTCC TGTACCACCA ACTGTTTGGC CCCTGTCATC
AAGGTACTGC ATGAAAAGAT TGGTATTGTA CACGGTACCA TGACCACCAT TCATGATATC
ACCAACACCC AAACCATTGT GGACAAAGGG CACAAAGATC TGCGCCGTGC CCGTGCCTGT
GGCAACTCCC TCATACCCAC CAGCACCGGA TCGGCCAAAG CGATCACCAA AATTTTTCCG
GAGTTGACCG GTAAACTCAA CGGTGTCGCG GTGCGTGTGC CCCTGCTCAA TGCCTCCCTC
ACCGATTGTG TCTTTGAAAT GGCCAAGCCC GTTACCGAAA GCGCCATCAA CACCCTGTTC
AAGGAGGCCT CTGAAAGTTA TCTGCACGGC ATTCTTGGTT ATGAAGAGCG GCCATTGGTC
TCGGTGGATT TTCTGAATGA TCCGCGTTCA GCCATTATCG ATGCCCCCTC CACCATGGTG
ATTGACGGCA CCCAGCTTAA AGTGTTGGCT TGGTACGATA ATGAGTGGGG CTATGTCAAT
CGCTTGATGG ACCTCGCGCT TAAAATCGCC AACACCTTAT AA
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| Protein sequence | MSVTIGINGF GRMGRLVLRA GWNSPGIIWG PINETSTDAH GSAHLLQFDS VHGRWQHPCT
AQQGEICIED SRIPYHSVAD IDAHHWSTCD LVIEATGKHH KQPHTLQRYF EQGVKKVLVA
APTEGALNLV YGVNDHLYQP QQHHLVTAAS CTTNCLAPVI KVLHEKIGIV HGTMTTIHDI
TNTQTIVDKG HKDLRRARAC GNSLIPTSTG SAKAITKIFP ELTGKLNGVA VRVPLLNASL
TDCVFEMAKP VTESAINTLF KEASESYLHG ILGYEERPLV SVDFLNDPRS AIIDAPSTMV
IDGTQLKVLA WYDNEWGYVN RLMDLALKIA NTL
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