Gene Mmc1_2963 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmc1_2963 
Symbol 
ID4483481 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMagnetococcus sp. MC-1 
KingdomBacteria 
Replicon accessionNC_008576 
Strand
Start bp3677295 
End bp3678176 
Gene Length882 bp 
Protein Length293 aa 
Translation table11 
GC content55% 
IMG OID639723710 
Productradical SAM domain-containing protein 
Protein accessionYP_866860 
Protein GI117926243 
COG category[C] Energy production and conversion 
COG ID[COG1032] Fe-S oxidoreductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.854509 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTGAGT ATGCAGGTCC GCTCTACCGT CCCCCCTCAG AGGCGGCGCA CCTGATCCTA 
CAAGCCACCA TCGGTTGCAG TGTTAACCAC TGCACATTTT GCAGCATGTA TCGGCATAAA
CGGTTTCACA TCAAACCCTT ACCGCAACTT TTTAAGGAAA TTGAGCATGC CGCCAGCGCA
TGGCCCACCG CCCGCCGGGT ATTCCTGGCC GACGGCGATG CACTGGTATT GCCCACCGAC
CATCTGGAGC GCATACTCGA TCATTTACGG CGACATCTCC CCCAATTGCA ACGGGTAAGC
TGTTATGCCC TACCGGCTAA TTTACGCAAA AAAAGCTTGC GCGAACTTAA CCGCCTAGCG
GCCAAAAAGC TGACTCTTAT CTATTATGGC ATGGAGAGTG GTGACGCTAA CCTGTTAAAA
ATCATCCGCA AGGGCGCCAC GCCCGAGGGC ATGGCCGCTG GAGTGTGGAA AGCCCATGAG
GCAGGCCTCA AGATCTCGGC TACGGTTATC CTAGGACTGG GTGGGCAGCG TCTGTGGCAG
AGCCATATTG ACCACACCGC TGAACTGATT AACCGGGTCC CCCTAAGCTA TCTTTCCACC
CTACAACTTT ACCTCGACCC TCACCTAGAG GCGGCATTTT TGGCACGCTT CACCCCCCCT
TTTCAGTTTC AACAGGACCA CCAGATTTTG CAGGAGTTGG CTCAGTTGGT GGCAGCGATT
AACCACCCAC CCAAGCGCAT AATCTTTCGT TCCAATCACG CCTCCAACGC GCTGGCCTTA
GCGGGCAATC TACCCGACCA TCAAGCCGCA CTGTTAGCCC GCATTGCCCA GGCCCAAGCC
AACGTACAAG GGTTGCGTCC CACCTGGACA CGCTCCCTTT AA
 
Protein sequence
MFEYAGPLYR PPSEAAHLIL QATIGCSVNH CTFCSMYRHK RFHIKPLPQL FKEIEHAASA 
WPTARRVFLA DGDALVLPTD HLERILDHLR RHLPQLQRVS CYALPANLRK KSLRELNRLA
AKKLTLIYYG MESGDANLLK IIRKGATPEG MAAGVWKAHE AGLKISATVI LGLGGQRLWQ
SHIDHTAELI NRVPLSYLST LQLYLDPHLE AAFLARFTPP FQFQQDHQIL QELAQLVAAI
NHPPKRIIFR SNHASNALAL AGNLPDHQAA LLARIAQAQA NVQGLRPTWT RSL