| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_2958 |
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| Symbol | |
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| ID | 4482032 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Magnetococcus sp. MC-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008576 |
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| Strand | - |
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| Start bp | 3671583 |
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| End bp | 3672557 |
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| Gene Length | 975 bp |
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| Protein Length | 324 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 639723705 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_866855 |
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| Protein GI | 117926238 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.835393 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAGCGA GTCTTAAAAT GAACCTTAAC CAGTTGCGTT ATGTCATGGC AGTCGCCCGG
CAAGGTACCT TTAGCCGAGC GGCCAAAATT TGCCATGTCA GCCAGCCTTC GCTCAGTGTG
GCGGTACGTA ACCTGGAAGA AGAGTTAGGG GTGGTGCTGT TTGAGCGCTT TAAACACGAG
GTGCGGGTCA CTACCGAGGG GGAGCGCATC TTGGCGCGCA TTCAACAAGC CCTTGAGGCG
GTGGCGCAAA TTGAGCTAGC GGCCCGTAGT GAGGAGAATG ACCCTCTAAA AGGTTCTTTA
CGGCTGGGGG CCATCTTTAC CATCGCCCCC TATCTTTTCC CCTCCTTTGT GCCCGAGCTG
CACCAGTGGG CGCCACAGTT AACCTTGCTG TTAGAAGAGA ATTTTACCGC CTCATTGTCA
GAAAAACTGA AACGGGGTGA GCTGGACGCC ATGGTCATTG CGCTGCCCTA TGATGAACCA
GGGGTTGTGA CAACACCCCT GTATGATGAA CCCTTTGTGG TGGGGATGCC TGCGGGCCAC
CCTTGGGCAG GGCGTCATGA TCTGTCGGGT AATGATCTGG CTGGGGAGCG GCTCTTGCTC
TTGGGCAAGG GGCACTGTTT TCGGGATCAG GTGTTGGAGA TCTGCCCCGC CTGTCACTAT
GTGGTGGATA CCGCGACTGG CCTGCACAAT ATTATCGAGG GCAGCTCCCT AGAGACCATT
CGCCATATGG TGGCCAGCGG GGTGGGGATC ACCGTGCTAC CCATGAGTTC GATTACCACC
ATGGTGTGCA GTTCACTTAA CTGCCCAGAA CAGAGCCGCT CGGCGCTGCG CTACGCTTAT
TTTAAGGAGC CCGCGCCAGT GCGGCGTATC GCACTGGCTT GGCGGGACTC CCATCCAAAC
CCGGAACTGC TTAAAGTGGT GTTGGCAGCC TTGTTGGCCA GTGTGCCCAA ACAAATGTTG
CTACTGAACG CTTAA
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| Protein sequence | MEASLKMNLN QLRYVMAVAR QGTFSRAAKI CHVSQPSLSV AVRNLEEELG VVLFERFKHE
VRVTTEGERI LARIQQALEA VAQIELAARS EENDPLKGSL RLGAIFTIAP YLFPSFVPEL
HQWAPQLTLL LEENFTASLS EKLKRGELDA MVIALPYDEP GVVTTPLYDE PFVVGMPAGH
PWAGRHDLSG NDLAGERLLL LGKGHCFRDQ VLEICPACHY VVDTATGLHN IIEGSSLETI
RHMVASGVGI TVLPMSSITT MVCSSLNCPE QSRSALRYAY FKEPAPVRRI ALAWRDSHPN
PELLKVVLAA LLASVPKQML LLNA
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